Helicobacter pylori Rif1: C695_02125
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Entry
C695_02125 CDS
T02317
Name
(GenBank) methionyl-tRNA ligase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
her
Helicobacter pylori Rif1
Pathway
her00450
Selenocompound metabolism
her00970
Aminoacyl-tRNA biosynthesis
her01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
her00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
C695_02125
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
C695_02125
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
her01007
]
C695_02125
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
her03016
]
C695_02125
Enzymes [BR:
her01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
C695_02125
Amino acid related enzymes [BR:
her01007
]
Aminoacyl-tRNA synthetase
Class I (U)
C695_02125
Transfer RNA biogenesis [BR:
her03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
C695_02125
Prokaryotic type
Other AARSs
C695_02125
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
tRNA-synt_1
tRNA-synt_1e
Anticodon_3
SAC3_GANP
Motif
Other DBs
NCBI-ProteinID:
AFV43234
LinkDB
All DBs
Position
430902..432854
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AA seq
650 aa
AA seq
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MQKSLITTPIYYVNDIPHIGHAYTTLIADTLKKYYTLQGEEVFFLTGTDEHGQKIEQSAR
LRNQSPKAYADSISTIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGA
YSGYYCVSCESYCAISKADNTNDKVLCPDCLRETTLLEEESYFFRLSAYEKPLLDFYAKN
PEAILPVYRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYAS
ALGYLNDLDNKMAHFECARHIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGV
KMSKSLGNVLDAQKIAMEYGIEELRYFLLREVPFGQDGDFSKKALIERINANLNNDLGNL
LNRLLGMAKKYFNHSLKSTKITAYYSKELEKVHQILDNANSFVPKMQLHKALEELFNVYD
FLNKLIAKEEPWVLHKNNESEKLEALLSLIANALLQSSFLLYAFMPKSAVKLANAFNTEI
TPDNYERFFKAKKLQDMILQDTEPLFSKMEKIEKTEKAGEASPEKNEKEKKDAKEKAPLK
QENYIGIEDFKKVEIKVGLIKEAQRIEKSNKLLRLKVDLGEGRLRQIISGIALDYEPESL
VGQMVCVVANLKPAKLMGEMSEGMILAVRDSDNLALISPTREKIAGSLIS
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaatcactgatcacaacccccatttattatgtgaatgacatccctcatattggc
catgcttatacgactttgattgcggacactttaaagaagtattacacgctccaaggcgaa
gaagtcttttttttaaccggcaccgatgagcatgggcaaaagatcgaacaaagcgcgagg
cttaggaatcaaagccctaaagcttacgccgatagcattagcacgatttttaaagaccag
tgggattttttcaatttggattatgatggttttatccgcaccacagacagcgaacatcaa
aaatgcgtgcagaacgcctttgaaatcatgtttgaaaaaggggatatttataaaggcgct
tatagcgggtattattgcgtgagctgtgagagttattgcgcgatctctaaagcggacaac
acgaacgataaagtcctatgccctgattgcttgagagagaccacgcttttagaagaagag
agttattttttcagattgagcgcgtatgagaagcctttgttggatttttacgctaaaaat
cctgaagcgattttgcccgtttatcgtaaaaatgaggtaacttcttttattgagcagggt
ttattggatctgtctatcacgcgcacgagctttgaatggggcattcctttgcctaaaaaa
atgaacgatcctaaacatgtggtgtatgtttggttggatgctttattgaattatgcgagc
gcactagggtatttgaatgatttagacaataaaatggcgcattttgaatgcgctaggcat
attgtgggtaaggatattttacgcttccatgccatttattggccggcttttttgatgagt
ttgaatttgcccctattcaaacagctttgcgtgcatgggtggtggacgatagagggcgtg
aaaatgagtaagagcttgggtaatgttttagacgctcaaaaaatcgctatggagtatggg
attgaagaattgcgctattttttattgcgtgaggtgccttttgggcaagacggggatttt
tctaaaaaagcgttaatagaaaggatcaatgcgaatttgaataacgatttggggaatttg
ttgaatcgtttgctaggcatggctaaaaaatatttcaatcattctctaaaaagcacaaaa
atcaccgcttattattctaaagagctagaaaaagtgcatcaaattttagataacgctaat
tcttttgtgcctaaaatgcaattgcataaagctttagaggaattgtttaatgtttatgat
tttttaaacaaactcatcgctaaagaagagccatgggttttgcacaaaaacaacgaatca
gaaaaactagaagccttattgagtttgatcgcaaacgcgcttttgcaatcaagctttttg
ctctatgcgttcatgccaaagagcgctgtgaaattagcgaatgctttcaacacagaaatc
acgcccgataattacgaacgcttttttaaagctaaaaaattacaagatatgattttacaa
gacaccgagcctttattttccaaaatggagaaaattgaaaagacggaaaaagcgggagaa
gcctcaccagaaaaaaacgaaaaagaaaaaaaggacgcaaaagaaaaagccccactaaaa
caagaaaactatatcggcattgaggatttcaaaaaagtagagatcaaagtggggcttatc
aaagaagctcaaaggattgaaaaatccaataaattactgcgcttaaaagtggatttaggc
gaaggccgtttgaggcagattatttcagggatcgctttggattatgagcctgaaagcttg
gtgggtcaaatggtgtgcgtggtggctaatttaaaacccgcaaagcttatgggcgaaatg
agtgagggcatgattttagcggtgcgagatagcgacaatctagccttaattagccccact
agagaaaaaattgcaggaagtttgatcagctaa
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