Helicobacter pylori Rif1: C695_02540
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Entry
C695_02540 CDS
T02317
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
her
Helicobacter pylori Rif1
Pathway
her00470
D-Amino acid metabolism
her00550
Peptidoglycan biosynthesis
her01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
her00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
C695_02540 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
C695_02540 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
her01011
]
C695_02540 (murD)
Enzymes [BR:
her01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
C695_02540 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
her01011
]
Precursor biosynthesis
Amino acid ligase
C695_02540 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
DUF3531
Motif
Other DBs
NCBI-ProteinID:
AFV43307
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Position
520601..521869
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AA seq
422 aa
AA seq
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MKISLLGHGKTTLALGRFFKKNHNEVKFFDDKFLSSFKDSEGFLCYPSKDFNPNDSQLEI
VSPGISFTHPLVIKAKHLVSEYDYINSLFDLVFTPTIISISGTNGKTTTTEMLTMLLEDF
KAVSGGNIGTPLIELFEKRSPLWVLETSSFSLHYTNKAYPLIYLLINIEADHLTWHCNFE
NYLNAKLKVLTLMPKTSLAILPLKFKEHPIIQNSQAQKIFFDKSEEVLERLKIPSNALFF
KGAFLLDAALALLVYEQFLKIKNLKWQDYRENALKRLNAFKIGSHKMEEFRDKQGRLWVD
DSKATNIDATLQALKTFKNQKIHLILGGDIKGVNLTPLFEEFKNYKISLYAIGSSAFIIQ
ALALEFNVSCQVCLELEKAVQEIKSVLSQNEIALLSPSAASLDQFSSYKERGEKFKAFVL
KD
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatctctttattggggcatggcaaaaccactctagccctagggcgtttttttaaa
aaaaaccataacgaagtcaaattttttgatgataaattcctttcatcttttaaagatagc
gagggttttctttgttatcctagtaaggattttaaccctaatgattcccaactagaaata
gtcagccctggcattagtttcacgcaccctttagtcataaaagccaagcatttagtgagc
gaatacgattatattaatagcttgtttgatttggttttcacgcctactataatcagtatt
agcggcactaacgggaaaaccaccacgacagaaatgctcaccatgcttttagaagatttt
aaggctgtgagtggggggaatatcggcacgcccttgattgaattgtttgaaaaacgatcg
cccttgtgggtgctagaaacaagctccttttctttgcattacaccaataaggcttaccct
ttaatctacttgcttatcaacatagaagccgatcatttgacttggcattgcaattttgaa
aattatttgaacgctaaactcaaggttctaacattgatgcctaaaacttcgctcgctatc
ctccctttaaaattcaaagaacaccccattattcaaaactcgcaagcgcaaaaaatcttt
tttgacaaaagtgaagaggttttagagcgtttaaaaatcccttctaacgctctttttttt
aagggagcgtttttattagacgcggctttagcccttttagtttatgagcaatttttaaaa
ataaagaatttaaaatggcaagattatagagaaaacgcccttaaaaggctgaacgctttt
aaaattggctcgcataaaatggaagaatttagggataaacaagggcgtttgtgggtagat
gacagcaaagccacgaacattgatgccaccttgcaagccctaaaaacctttaaaaaccaa
aaaatccatttgattttagggggcgatattaaaggggtcaatttaacccccctttttgaa
gagtttaaaaactataaaataagtctttatgccataggttcaagcgcttttatcatccaa
gccttagcgttagaatttaatgtttcttgtcaggtttgtttggagttagaaaaagcggtt
caagaaattaaaagcgttttatcgcaaaatgaaatcgctttgctttcacctagtgcagcc
agtttggatcaattttcttcgtataaagaaaggggtgaaaaatttaaagcgtttgtttta
aaggattaa
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