Helicobacter pylori Rif1: C695_02845
Help
Entry
C695_02845 CDS
T02317
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
her
Helicobacter pylori Rif1
Pathway
her03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
her00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C695_02845 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
her03021
]
C695_02845 (rho)
03019 Messenger RNA biogenesis [BR:
her03019
]
C695_02845 (rho)
Transcription machinery [BR:
her03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
C695_02845 (rho)
Messenger RNA biogenesis [BR:
her03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
C695_02845 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
ATPase_2
S1CSD-TOTE-2
AAA_22
AAA_28
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
AFV43364
LinkDB
All DBs
Position
complement(585396..586712)
Genome browser
AA seq
438 aa
AA seq
DB search
MNENAPTHKSSHKVKTHTPVSGYHIEDLRTYPTEKLLEIANKLKVENPQEFKRQDLMFEI
LKTQVTQGGYILFTGILEIMPDGYGFLRGFDGSFSDGHNDTYVSPSQIRRFALRNGDIVT
GQVRSPKDQEKYYALLKIEAINYSPSDEIRNRPLFDNLTPLFPDEQIKLEYEPTKVTGRM
LDLFSPVGKGQRALIVAPPRTGKTELMKELAQGITSNHPEVELIILLVDERPEEVTDMQR
SVKGQVFSSTFDLPANNHIRIAELVLERAKRRVEMGKDVVVLLDSITRLARAYNAVTPSS
GKVLSGGVDANALHRPKRFFGAARNIEEGGSLTIIATALIETGSRMDEVIFEEFKGTGNS
EIVLARNIADRRIYPAFDILKSGTRKDNILLGKDRLTKVWVLRNVMQQMDDIEALSFVYS
KMQQTKDNEEFLNLMNEK
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaaacgcgcctacgcacaaaagttcgcacaaagtcaaaacacacacgccagtg
agcggttatcacattgaagatttacgcacctaccctactgaaaagcttttagaaatcgct
aacaagctcaaagtggaaaacccccaagaattcaaacgacaagacttgatgtttgaaatt
ttaaaaacccaagttacgcaaggcggatacattctttttaccgggattttagaaatcatg
cctgatgggtatggctttttaagagggtttgatgggagtttttcagacgggcataacgac
acatatgttagcccttctcaaatcaggcgttttgctttaaggaatggcgatattgttacc
ggtcaagtgcgatcccccaaagatcaagaaaaatactacgcccttttaaaaatagaagct
atcaattactcgccttcagatgagattagaaaccgccccttatttgacaatctaaccccc
ctattccctgatgaacagatcaaattagaatacgaacccactaaagttaccggcagaatg
ctagatttattcagccctgtggggaaaggccaaagggctttgatcgtcgcgccaccaagg
actgggaaaacggagctgatgaaagaactcgcccaaggcatcacttctaaccaccctgaa
gtggagctgattatccttctagtggatgagcgccctgaagaagttacggatatgcaacga
agcgttaagggtcaagtttttagctccacttttgatttgcccgcaaacaaccacataaga
atcgctgaattagtcctagaaagggccaaaaggcgcgtggaaatgggcaaagatgtggtg
gttttattggattctatcacccgtttagccagagcgtataacgctgtaacgccttcaagc
ggtaaggttttaagtggaggcgtggatgcaaacgccttgcataggcccaagcgttttttt
ggagccgcaaggaatattgaagaaggcgggagcttgacgattatcgctacggcgttgatt
gaaacgggatctagaatggatgaggtgatttttgaagaatttaaaggcaccgggaatagc
gaaatcgttttagcgaggaatattgcggacaggcgcatttacccggcctttgatatttta
aaatccggcacacgaaaagacaatatcttgcttggcaaagaccgcttgactaaagtgtgg
gttttaaggaatgtgatgcaacaaatggacgacatagaagccttaagctttgtgtattct
aaaatgcaacaaactaaggacaatgaagaatttttaaatttaatgaatgaaaaataa
DBGET
integrated database retrieval system
