Helicobacter pylori Rif1: C695_02925
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Entry
C695_02925 CDS
T02317
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
her
Helicobacter pylori Rif1
Pathway
her00300
Lysine biosynthesis
her00470
D-Amino acid metabolism
her01100
Metabolic pathways
her01110
Biosynthesis of secondary metabolites
her01120
Microbial metabolism in diverse environments
her01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
her00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
C695_02925 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
C695_02925 (dapF)
Enzymes [BR:
her01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
C695_02925 (dapF)
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Paralog
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
AFV43378
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All DBs
Position
complement(598056..598877)
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AA seq
273 aa
AA seq
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MVFYKYSGSGNDFLIVQSFKKKDFSNLAKQVCHRHEGFGADGLVVVLPSKDYDYEWDFYN
SDGSKAGMCGNASRCVGLFAYQHAIASKNHVFLAGKREISICIEEPNIIESNLGNYKILD
VIPALRCEKFFSSGSVLEHIPTFYLIDTGVPHLVGFVENKEGLNSLNTLELRALRHEFNA
NINIAFIENKETIFLQTYERGVEDFTLACGTGMAAVFIAARIFYNTPKKAALIPKSNESL
ELSLKNDGIFYKGAVRYIGMSVLGMRVFENGCF
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atggtgttttacaagtattcagggagcgggaatgattttttaatcgttcaaagtttcaaa
aaaaaagatttttcaaatttagccaaacaggtgtgccataggcatgagggttttggggct
gatgggcttgtagtcgtcttaccgagtaaggattatgactacgaatgggatttttacaat
tcagacggctctaaagctggcatgtgcgggaatgcgagccgttgcgtggggttatttgct
taccagcatgctatagcctctaaaaaccatgtttttttagccggaaaaagagagatttct
atttgcatagaagaacccaatatcatagagagcaatcttggtaactacaaaatcctagat
gtaatacccgctttaagatgcgaaaaatttttttcaagcggcagcgttttagaacatatc
cctactttctatctcatagatacaggagtgccgcatttagtgggatttgtggaaaataaa
gaggggttaaattcccttaacacgctagaattaagggctttaaggcatgaatttaacgct
aatattaacatcgcttttatagaaaataaagagacgatttttttacaaacttatgaaaga
ggggttgaagatttcacgctggcttgcgggacaggcatggcggcggtttttatcgccgca
cgcattttttataacacgcctaaaaaagccgctctcatccctaaaagcaacgaatcttta
gagctttctttaaaaaatgatggaattttttataaaggcgcggtgcgttatattggcatg
agtgttttgggcatgagggtttttgaaaatgggtgtttttga
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