Helicobacter pylori Rif1: C695_03090
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Entry
C695_03090 CDS
T02317
Name
(GenBank) penicillin-binding protein 1A (PBP-1A)
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
her
Helicobacter pylori Rif1
Pathway
her00550
Peptidoglycan biosynthesis
her01100
Metabolic pathways
her01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
her00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
C695_03090
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
C695_03090
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
her01003
]
C695_03090
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
her01011
]
C695_03090
Enzymes [BR:
her01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
C695_03090
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
C695_03090
Glycosyltransferases [BR:
her01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
C695_03090
Peptidoglycan biosynthesis and degradation proteins [BR:
her01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
C695_03090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
AFV43411
LinkDB
All DBs
Position
complement(630851..632830)
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AA seq
659 aa
AA seq
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MLKKIFYGFIVLFLIVMGLLAILIAQVWVTTDKDIAKIKDYRPGVASQILDRKGRLIANI
YDKEFRFYARFEEIPPRFIESLLAVEDTLFFEHGGINLDAIMRAMIKNAKSGRYTEGGST
LTQQFVKNMVLTREKTLTRKLKEAIISIRIEKVLSKEEILERYLNQTFFGHGYYGVKTAS
LGYFKKPLDKLTLKEITMLVALPRAPSFYDPTKNLEFSLSRANDILRRLYSLGWISSNEL
KGALNEVPIVYNQTSTQNIAPYVVDEVLKQLDQLDGLKTQGYTIKLTIDLDYQRLALESL
RFGHQKILEKIAKEKPKTNASNEDEDNLNASMIVTDTSTGKILALVGGIDYKKSAFNRAT
QAKRQFGSAIKPFVYQIAFDNGYSTTSKIPDTARNFENGNYSKNSEQNHAWHPSNYSRKF
LGLVTLQEALSHSLNLATINLSDQLGFEKIYQSLSDMGFKNLPKDLSIVLGSFAISPIDA
AEKYSLFSNYGTMLKPMLIESITNQQNDVKTFTPMETKKITSKEQAFLTLSVLMDAVENG
TGSLARIKGLEIAGKTGTSNNNIDAWFIGFTPTLQSVIWFGRDDNTPISKGATGGVVSAP
VYSYFMRNILAIEPSLKRKFDVPKGLRKEIVDKIPYYSTPNSITPTPKRTDDSEERLLF
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaaaagattttttatggttttatcgttttatttttgattgtcatggggttatta
gccattcttatcgctcaagtttgggtaactacggataaggatattgctaaaattaaagat
tatcgcccaggcgtcgcttcacagattttagaccgaaaagggcgtttgatcgctaatatc
tatgataaggaatttcgtttttatgcgcgttttgaagaaatccccccacgatttattgaa
agccttttagcggtagaagacaccctcttttttgaacatggggggatcaatttagacgct
atcatgcgcgctatgattaaaaacgctaaaagcggtcgttacaccgaggggggtagcacc
ctaacccaacaattcgttaaaaacatggtgctcacacgagaaaaaaccctaaccagaaaa
ctcaaagaagcgatcatttctatacgcattgaaaaagtcttaagcaaagaagaaatttta
gagcgttatttgaaccaaactttttttgggcatgggtattatggcgtgaaaaccgcaagt
ttagggtattttaaaaaaccccttgacaaactcacgcttaaagaaatcaccatgctagtc
gccttgcctagggctccgagtttttatgatcctaccaaaaatttagaattttcactctct
agggctaatgatattttaaggcggttgtattctttaggctggatttcttctaacgagctc
aaaggcgctctcaatgaagtgccaattgtttataaccaaacctccacgcaaaacatcgcc
ccctatgtcgtagatgaagtgttgaagcaattggatcaattagacgggttaaaaactcaa
ggctataccataaagctcacgatagatttggattaccaacgcttagcgttagagtccttg
cgttttgggcatcaaaaaatcttagaaaaaatcgctaaagaaaagccaaaaactaacgcg
tctaatgaagatgaagacaacttaaacgctagcatgatcgttacagacacgagcaccggt
aagattttagctttagtgggggggattgattataaaaaaagcgctttcaatcgcgccacg
caagccaaacggcagtttgggagcgcgataaagccttttgtgtatcagatcgcttttgat
aatggctattccacgacttctaaaatccctgataccgcgcgaaactttgaaaatggcaat
tatagtaaaaacagtgaacaaaaccacgcatggcaccccagcaattattctcgcaagttt
ttagggcttgtaaccttgcaagaagccttgagccattcgttaaatctagccacgatcaat
ttaagcgatcagcttggctttgaaaaaatttatcaatctttaagcgatatggggtttaaa
aacctccctaaggacttgtctattgtgttagggagctttgctatctcacccattgatgca
gctgaaaagtattctttattttctaattacggcaccatgctcaaacccatgctcattgaa
agcatcactaaccaacaaaacgatgtcaaaactttcacgcctatggaaaccaaaaagatc
acctccaaagaacaggcttttttaaccctttcagtgctgatggatgcggtagaaaatggc
acagggagtttggctcgcattaaaggtttagaaatcgccggtaaaaccgggacttctaac
aacaatattgacgcttggttcattggctttacccccaccttgcaaagcgtgatctggttt
gggagggacgataacacgcctattagcaaaggagcgacagggggtgttgtgagtgcgcct
gtgtattcgtatttcatgcgtaacattttagcgattgaaccttctttaaaaagaaagttt
gatgtccccaaaggcttgcgtaaagaaatcgtggataaaatcccctactattcaaccccc
aattccatcacccccacccccaaaagaacagacgatagcgaggaacgcttgttgttctaa
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