Helicobacter pylori Rif1: C695_03620
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Entry
C695_03620 CDS
T02317
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
her
Helicobacter pylori Rif1
Brite
KEGG Orthology (KO) [BR:
her00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
her03032
]
C695_03620
03400 DNA repair and recombination proteins [BR:
her03400
]
C695_03620
Enzymes [BR:
her01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
C695_03620
DNA replication proteins [BR:
her03032
]
Prokaryotic type
DNA Topoisomerases
C695_03620
DNA repair and recombination proteins [BR:
her03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
C695_03620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Retrotran_gag_2
Motif
Other DBs
NCBI-ProteinID:
AFV43511
LinkDB
All DBs
Position
752523..755006
Genome browser
AA seq
827 aa
AA seq
DB search
MQDNSVNETKNIVEVGIDSSIEESYLAYSMSVIIGRALPDARDGLKPVHRRILYAMHELG
LTSKVAYKKSARIVGDVIGKYHPHGDNAVYDALVRMAQDFSMRLELVDGQGNFGSIDGDN
AAAMRYTEARMTKASEEILRDIDKDTIDFVPNYDDTLKEPDILPSRLPNLLVNGANGIAV
GMATSIPPHRMDEIIDALVHVLENPNAGLDEILEFVKGPDFPTGGIIYGKAGIIEAYKTG
RGRVKVRAKVHVEKTKNKEIIVLDEMPFQTNKAKLVEQISDLAREKQIEGISEVRDESDR
EGIRVVIELKRDAMSEIVLNHLYKLTTMETTFSIILLAIYNKEPKIFTLLELLHLFLNHR
KTIIIRRTIFELEKAKARAHILEGYLIALDNIDEIVRLIKTSQSPEAAKNALMERFTLSE
IQSKAILEMRLQRLTGLERDKIKEEYQNLLELIDDLNGILKSEDRLNGVVKTELLEVKEQ
FSSPRRTEIQESYENIDIEDLIANEPMVVSMSYKGYVKRVDLKAYEKQNRGGKGKLSGST
YEDDFIENFFVANTHDILLFITNKGQLYHLKVYKIPEASRIAMGKAIVNLISLAPDEKIM
ATLSTKDFSDERSLAFFTKNGVVKRTNLSEFESNRSCGIRAIVLDEGDELVSAKVVDKNA
KHLLIASHLGIFIKFPLEEVREIGRTTRGVIGIKLNENDFVVGAVVISDDGNKLLSVSEN
GLGKQTLAEAYRGQSRGGKGVIGMKLTQKTGNLVGVISVDDENLDLMILTASAKMIRVSI
KDIRETGRNASGVKLINTADKVMYVNSCPKEEEPENLETSSAQNLFE
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgcaagataattcagtcaatgaaacaaaaaatattgtagaagtggggattgattcttct
attgaagagagctatttagcttattccatgagcgtgatcatagggcgcgctttaccggac
gctagagatggcttaaagcccgtgcataggcgtattttgtatgcgatgcatgaattaggc
cttacttcaaaagtcgcttacaaaaaaagcgctaggatcgtgggtgatgtgattggtaaa
taccacccccatggcgataatgcggtttatgatgcgctagtgagaatggcgcaagatttt
tccatgcgtttggaattagtggatgggcagggcaactttggctctattgatggcgataac
gccgcagcgatgcgttacactgaagccagaatgactaaggcgagtgaagaaattttaagg
gatattgataaagacaccattgattttgtgcctaattatgacgataccttaaaagagcca
gatattttaccaagccgtctgcctaaccttttagtcaatggggctaatgggatcgctgtg
gggatggcgacttctatcccccctcacaggatggatgaaatcatagacgctttagtgcat
gtcttagaaaaccctaacgctggattagatgaaatcttagaatttgtcaaagggcctgat
tttcccactggtgggatcatttatggcaaggcgggtattattgaagcctataaaacgggg
cgaggacgcgtgaaagtgcgggccaaagtgcatgtggaaaaaacaaaaaataaagaaatc
atcgttttagatgaaatgccttttcaaaccaataaagccaaattagtggaacaaatcagc
gatttagcgcgagaaaagcaaattgaaggcattagtgaagtgcgcgatgagagcgataga
gagggcattagagtggtgattgaattaaaaagagacgcgatgagtgaaattgtcttaaac
cacctctacaaactcaccactatggaaaccacttttagcatcattttactcgctatttac
aataaagagcctaagattttcacgcttttagagttgttgcaccttttcttaaaccacaga
aaaaccattattataagacgcacgatttttgaattagaaaaggctaaggccagagcgcat
attttagagggctatttgatcgcactagacaatattgatgaaatcgtgcgactcattaaa
acaagccaaagcccagaagcggctaaaaacgccttaatggagcgtttcactttgagcgag
attcaaagcaaggccattttagaaatgcgtttgcaacgcttaacaggccttgaaagggat
aagatcaaagaagaataccaaaacttgttggagcttattgatgatctcaatggcatttta
aagagcgaagatcgcttgaatggagtcgtcaaaacagagcttttagaagtcaaagagcaa
ttttcttctccaaggcgcactgaaattcaagaatcttatgaaaatattgacatagaagat
ttgatcgctaatgagcctatggtagtgagcatgagttataaaggctatgtgaaaagagtg
gatttaaaagcttatgaaaagcaaaatcgtggtggtaaaggcaagctttcaggcagcact
tatgaagacgatttcattgaaaacttttttgtggctaacacgcatgatattttgctcttt
atcaccaataaggggcaattgtatcatttgaaagtctataaaatcccagaagcgagccgg
atcgctatgggtaaagccattgtaaatttaatctcgctcgctccggatgaaaagatcatg
gcgactctaagcaccaaagactttagcgatgaacgctctttggccttcttcacgaaaaat
ggcgtggtgaagcgcaccaatttgagcgaatttgaaagcaacaggagttgtggtatcaga
gcgattgttttagatgaaggcgatgaattagtgagcgcaaaagttgtggataaaaacgct
aagcatttgctcatcgcatcgcatttgggcattttcattaaattccctttagaagaggtg
cgcgagatcggaagaactactcgtggggttataggcatcaagctgaatgaaaacgatttt
gttgtcggtgcggtcgttattagcgatgatggcaacaagcttttgagcgtgagtgaaaac
gggcttggcaagcaaactttagccgaagcgtatagagggcaatctcgtggaggtaagggg
gtcattggcatgaagctcactcaaaaaaccggcaatctagtgggcgttatcagcgtggat
gatgaaaatttggatttgatgatccttactgcaagcgcaaaaatgatcagagtttctatt
aaagatattagagaaaccggaagaaacgctagtggggtaaagctcataaacaccgccgat
aaagtcatgtatgtcaattcttgccctaaagaagaagagccagaaaatttagaaacctct
tcggcacaaaatttgtttgagtga
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