Helicobacter pylori Rif1: C695_03695
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Entry
C695_03695 CDS
T02317
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
her
Helicobacter pylori Rif1
Pathway
her03030
DNA replication
her03430
Mismatch repair
her03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
her00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C695_03695
03430 Mismatch repair
C695_03695
03440 Homologous recombination
C695_03695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
her03032
]
C695_03695
03400 DNA repair and recombination proteins [BR:
her03400
]
C695_03695
Enzymes [BR:
her01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C695_03695
DNA replication proteins [BR:
her03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C695_03695
DNA repair and recombination proteins [BR:
her03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C695_03695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
AAA_14
RuvB_N
RCF1-5-like_lid
AAA_5
DNA_pol3_gamma3
AAA_30
EH_Signature
DEAD
AAA_assoc_2
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AFV43524
LinkDB
All DBs
Position
complement(770480..772216)
Genome browser
AA seq
578 aa
AA seq
DB search
MQVLALKYRPKHFSELVGQESVAKTLSLALDNQRLANAYLFSGLRGSGKTSSSRIFARAL
MCEEGPKAVPCDTCIQCQSALNNHHIDIIEMDGASNRGIDDVRNLIEQTRYKPSFGRYKI
FIIDEVHMFTTEAFNALLKTLEEPPSHVKFLLATTDALKLPATILSRTQHFRFKKIPENS
VISHLKTILEKEQVSYETSALEKLAHSGQGSLRDTITLLEQAINYCDNAITESKVAEMLG
AIDRSVLEDFFQSLINQDEARLKERYAILENYETESVLEEMMLFLKAKLLSPDFYSILLI
ERFFKIIMSSLSLLKEGANASFVLLLLKMKFKEALKFKALDDAILELEQTPFNQNPSISY
NAPKQESKNIEKREKIEQIERIEGTEKREKLEKKENAETPQTPMLSAKDRIFHNLFKQVQ
TLVYERNYELGAVFEKNIRFIDFDSQTKTLTWESLATDKDKELLRERFKIVKSIVDGVFG
KGESIKIALKNHSENKSTLEVVKELKFPYSKPKPTTETTAETKEKETKEKEIQENDTKEI
QEVQPKQAPTALQEFMANHSELIEEIKSEFEIKSVELL
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgcaagttttagcgttaaaataccgccccaaacattttagcgagctagtcggtcaagag
agcgtggctaaaacgctttctttagccctagacaaccagcgtttggctaacgcttattta
ttcagcgggttaagaggctcagggaaaaccagctcttctaggatttttgctagggcttta
atgtgtgaagaagggccaaaggctgtgccttgcgatacttgcatccaatgccagagcgct
ttaaacaaccaccacatagatattatagaaatggatggggcgtctaatagggggattgat
gatgtccgtaatctcatagagcaaacgcgctacaaaccaagctttgggcgctataaaatc
tttatcattgatgaagtgcatatgttcaccaccgaagcgtttaacgcgcttttaaagact
ttagaagagcctcctagccatgtgaaattccttttagcgacaacagacgccttgaaactg
cccgctaccatactcagccgcacccagcatttcaggtttaaaaaaatccctgaaaattcc
gttatttctcatttaaaaaccattttagaaaaagaacaagtgagttatgaaacaagcgcg
ttagaaaaactggctcacagcgggcaagggagcctaagggatacgatcactcttttagaa
caagccatcaattattgcgataacgctatcacagaaagcaaggtggctgaaatgttagga
gcgattgacagaagcgttttagaagattttttccaaagcctaatcaaccaagatgaagcg
cgattaaaagagcgttatgccattttagaaaattatgaaaccgagagcgttttagaagaa
atgatgctttttttgaaagcgaaattattgagccctgatttttattctatccttttgata
gagcgcttttttaaaatcattatgagcagtttgagccttttaaaagaaggggcaaatgcc
agttttgtgctgttgttattgaaaatgaaattcaaagaagctttgaaattcaaagcccta
gacgatgcgattttggaattagagcaaacccctttcaatcaaaaccctagcataagctat
aacgcccctaaacaagaatctaaaaatatagaaaaaagagaaaaaatagaacaaatagaa
agaatagagggaacagaaaaaagagaaaaactagaaaaaaaagagaacgcagaaaccccg
caaactcccatgctttcagctaaagatcgcatttttcacaaccttttcaaacaagttcaa
acattggtttatgagcgcaattatgagttaggggcggtgtttgaaaaaaatatccgtttc
attgattttgacagccagactaaaaccttgacttgggagtctttagccactgataaggat
aaggagcttttaagagaacgatttaaaatcgtgaaaagtatcgttgatggggtttttggc
aagggcgaaagtatcaaaatcgctttaaaaaatcattcagaaaataaaagcactttagaa
gtggttaaagagcttaaattcccttattcaaagcccaaaccaaccactgaaacgacggct
gaaacgaaagaaaaagaaactaaagaaaaagagattcaagaaaacgacactaaagagatt
caagaagtccaaccaaaacaagcccctacagcgttgcaagaattcatggctaaccactct
gagctgattgaagagattaagagcgagtttgaaatcaaaagcgtggaattgttatga
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