Helicobacter pylori Rif1: C695_03805
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Entry
C695_03805 CDS
T02317
Name
(GenBank) UDP-MurNac-pentapeptide presynthetase (murF)
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
her
Helicobacter pylori Rif1
Pathway
her00300
Lysine biosynthesis
her00550
Peptidoglycan biosynthesis
her01100
Metabolic pathways
her01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
her00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
C695_03805
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
C695_03805
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
C695_03805
Enzymes [BR:
her01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
C695_03805
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Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
AFV43546
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Position
794746..796227
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AA seq
493 aa
AA seq
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MQSLSWLNLAFRWLFITGLGYYIMTLLQWYHYSVFRILTKHHKMRWHGIYFLLPLGVFIL
SYAFTMPFVFDFFCGVIQMPMLIVWAKRNDKPLVFTPRVKRFFIFLLLFLILHEILNIEL
VPLDGISLALGYLCLFIFVLSASLISEKALSKQYLQTAKDKITSLKNLKVIAITGSFGKT
STKNFLLQILQTTFNAHASPKSVNTLLGLANDINQNLDDRSEIYIAEAGARNKGDIKEIT
CLIEPHLVVVAEVGEQHLEYFKTLENICETKAELLDSKRLEKAFCYSVEKIKPYAPKDSP
LIDYSSLVKNIQSTLKGTSFEMLIGSVWERFETKVLGEFSAYNIASAILIAKHLGLETER
IKRLVLELNPIAHRLQLLEVNQKIIIDDSFNGNLKGMLEGIRLASLHKGRKVIVTPGLVE
SNTESNEALAQKIDGVFDVAIITGELNSKTIASQLKTPQKILLKDKAQLENILQATTIQG
DLILFANDAPNYI
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagtcttagttggctgaatttagcgtttcgttggctctttataacagggcttggc
tattatataatgactttattgcaatggtatcattacagcgtgtttaggatcttaaccaag
caccacaaaatgcgttggcatgggatttattttttattgcctttaggggtgtttattctg
tcgtatgctttcacaatgccgtttgtttttgatttcttttgcggcgttattcaaatgccc
atgctcattgtttgggccaaacgcaacgacaagcctttagttttcacgccaagggtgaag
cgcttttttatcttcttattattatttttaatcttgcatgaaatcttaaatatagaatta
gtccctttggatgggatttcgctcgcgctaggctatttgtgtttgtttatattcgtttta
agcgcttctttaatctctgaaaaagccttatccaagcagtatttgcaaaccgctaaagat
aaaatcacctctttaaagaatttaaaagtcatcgccattaccggaagctttgggaaaacc
agcaccaaaaatttcttgcttcaaatcttacaaaccacattcaacgcgcatgcaagcccc
aaaagcgtcaatacccttttagggcttgcgaatgatattaatcagaatttagacgatagg
agtgaaatctatatcgctgaagccggggcaaggaataagggcgatattaaagaaatcacc
tgtctcattgaaccgcaccttgttgtggttgcagaagtgggcgaacagcatttagaatac
tttaaaactttagaaaatatttgcgagactaaagcggaattattggattccaaacgctta
gaaaaagccttttgttactcggtggaaaagatcaagccctatgcccctaaagatagccct
ttaatagactattctagcctggttaaaaacatccaatccactttaaaaggcacttctttt
gaaatgcttataggtagcgtttgggaaagatttgaaacaaaggttctaggggagtttagc
gcttataatatcgcttcagccattttaatcgctaagcatttaggcttagagaccgaaagg
atcaaacggcttgttttagaactcaaccctattgctcatcgtttgcaacttttggaagtg
aatcaaaaaatcatcatagacgatagctttaatgggaatttaaagggcatgttagagggc
attcgtttagcgagtttgcacaaagggcgtaaagtcattgtaacaccgggcttagtggaa
agcaatacagaaagtaatgaggctttagcgcaaaaaatagacggggtttttgatgtcgct
atcatcacaggggagttgaattccaaaacgattgcttcacaattgaaaaccccccaaaaa
atcttactcaaggataaggcgcaattggaaaatatcttacaagccaccacgattcaaggc
gatttgattttattcgctaatgacgcccctaattacatttag
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