Helicobacter pylori Rif1: C695_04735
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Entry
C695_04735 CDS
T02317
Symbol
carB
Name
(GenBank) carbamoyl phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
her
Helicobacter pylori Rif1
Pathway
her00220
Arginine biosynthesis
her00240
Pyrimidine metabolism
her00250
Alanine, aspartate and glutamate metabolism
her01100
Metabolic pathways
her01110
Biosynthesis of secondary metabolites
her01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
her00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
C695_04735 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
C695_04735 (carB)
00220 Arginine biosynthesis
C695_04735 (carB)
Enzymes [BR:
her01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
C695_04735 (carB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
ATP-grasp_3
ATP-grasp_4
Dala_Dala_lig_C
ATPgrasp_Ter
RimK
ATP-grasp_2
Motif
Other DBs
NCBI-ProteinID:
AFV43725
LinkDB
All DBs
Position
complement(974173..977430)
Genome browser
AA seq
1085 aa
AA seq
DB search
MPKRTDISNILLIGSGPIVIGQACEFDYSGTQSCKTLKSLGYRVILINSNPATVMTDPEF
SHQTYIQPITPENIATIIEKEKIDAILPTMGGQTALNAVMQMHQKGMLEGVELLGAKIEA
IKKGEDRQAFKEAMLKIGMDLPKGRYAYTELEALEAINEIGFPAIIRASFTLAGGGSGVA
YNIEEFQELAKNALDASPINEILIEESLLGWKEYEMEVIRDSKDNCIIVCCIENIDPMGV
HTGDSITIAPSLTLTDKEYQRMRDASFAILREIGVDTGGSNVQFAIHPETLRMVVIEMNP
RVSRSSALASKATGFPIAKVATMLAVGFSLDEIQNDITNTPASFEPSLDYIVVKIPRFAF
EKFAGVSSTLGTSMKSIGEVMAIGGNFLEALQKALCSLENNWLGFESLSKDLEAIKKEIR
RPNPKRLLYIADAFRLGVCVDEVFELCQIDRWFLSQIQKLVEVEESINSSVLTDAKKLRG
LKNLGFSDARIAAKIKENENLEVSPFEVELARSNLQIVPNFEEVDTCAAEFLSLTPYLYS
TYAPNPLPPIENKQEKKEKKILIIGSGPNRIGQGIEFDYCCVHASLALKDLNIKSVMFNC
NPETVSTDYDTSDTLYFEPIHFECVKSIIQRERVDGIIVHFGGQTPLKLAKDLAKMQAPI
IGTPFKVIDIAEDREKFSLFLKELDIKQPKNGMAKSVDEAYSIANVIGFPIIVRPSYVLG
GQHMQILENIEELRHYLESVTHALEISPKNPLLIDKFLEKAVELDVDAICDKKEVYIAGI
LQHIEEAGIHSGDSACFIPSTLSPEILDEIERVSAKIALHLGVVGLLNIQFAVHQNSLYL
IEVNPRASRTVPFLSKALGVPLAKVATRVMVLEDLKEALKFYDKKNIVGYSKGVYKPKMP
HFVALKEAVFPFNKLYGSDLILGPEMKSTGEVMGIARSLGLAFFKAQTACFNPIKNKGLI
FVSIKDKDKEEACVLMKRLVQLGFELCATEGTHKALEKAGVKSLKVLKISEGRPNIMDLM
MNGEISMAINTSDHKSQDDAKLIRASVLKNHVSYFTTLSTIEVLLLALEESSKEDELLAL
QDYLK
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaacgcaccgatatttccaacattctactgataggatcaggccctattgtgatc
ggacaagcttgcgaatttgactactcagggactcaaagttgtaaaaccttaaaatcttta
ggttatagagtgatcttaatcaattctaacccggccaccgtgatgactgaccctgaattt
tctcatcaaacttatatccaacccatcaccccagaaaatatcgccactatcattgaaaaa
gaaaagattgacgctattttacccacaatgggcgggcaaaccgctttgaatgcggtcatg
caaatgcaccaaaagggcatgttagaaggcgtggagcttttgggggctaagattgaagcg
attaaaaaaggcgaagacaggcaggctttcaaagaagcgatgttaaaaatcgggatggat
ttgcctaaagggcgttatgcttacacggagttagaagccctagaagccattaatgaaatt
ggctttccagccattatcagagcgagtttcactctggctgggggggggagtggggtcgct
tacaatattgaagagtttcaagaattggctaaaaacgccctggacgcttcgcccattaat
gaaattttgattgaagagtccttattggggtggaaggaatacgaaatggaagtcatacga
gacagcaaggacaattgcatcattgtgtgctgcattgaaaatattgaccccatgggcgtt
cataccggcgatagcatcaccatcgctccaagcctaaccttaaccgataaagaataccaa
cgcatgcgcgatgcgagctttgcgattttgagagaaattggcgtggatacgggcgggagt
aatgtgcaatttgcgatccaccccgagactttaagaatggtcgtgattgaaatgaaccca
cgggtgagccgcagctccgcattagcttcaaaagcgaccgggtttcccattgcaaaagtc
gctaccatgcttgcggtgggttttagcttagatgaaatccaaaacgatattaccaacacc
ccggcgagttttgagcctagtttggattatatcgtggtgaaaatccctcgctttgcgttt
gaaaagtttgccggtgtttctagcactttagggacttctatgaaaagcattggcgaagtg
atggcgataggggggaatttcttagaagccttacaaaaagcgctatgctctttggaaaac
aattggctagggtttgaatcgttaagcaaagatttagaagcgatcaaaaaggaaatccgc
cggcccaatcccaaacgcttgctttatatcgctgatgcgttcaggctcggcgtttgtgtt
gatgaagtgtttgaattgtgccagattgacaggtggtttttatctcaaatccaaaagcta
gtagaagtggaagaaagcatcaattctagcgttttaacagacgctaaaaaattaagaggg
cttaaaaatttaggctttagcgatgctaggattgccgctaaaatcaaagaaaatgaaaat
ttagaggtcagcccttttgaagtggaattagctagatctaatttacaaatcgtgcccaat
tttgaagaagtggacacttgcgcggcggagtttttatcgctcacgccttatttgtattcc
acctatgcccccaatcctttgccccctattgaaaacaaacaagaaaagaaagaaaagaaa
atcctaatcataggctctgggcctaatcgcatcggtcaaggcattgaatttgattattgt
tgcgtgcatgcgagccttgctttaaaagatttaaacattaaaagcgtcatgttcaattgc
aatccagaaactgttagcacggattatgataccagcgacacgctctattttgaacccatt
cattttgagtgcgtgaaaagcatcatccaaagggagcgagtggatggcattatcgtgcat
tttgggggacaaacccctttaaaactcgctaaagatttggctaaaatgcaagcccccatt
attggcacgccttttaaagtgattgatattgcagaagacagggaaaaattttccctcttt
ttaaaagagcttgacatcaagcagcccaaaaacggcatggctaagagcgttgatgaagct
tatagcatcgctaatgtgattggtttccctatcattgtgcgccctagttatgtgctaggc
ggccaacacatgcaaattttagaaaacattgaggaattgcgccattatttggaaagcgtt
acgcatgctttagagattagtcctaaaaacccgcttctcattgataagtttttagaaaaa
gcggtggaattagatgtggatgctatttgcgataaaaaagaggtttatattgccggcatt
ttacagcacattgaagaagccggaatccattcaggcgattcggcgtgctttatcccttcc
actctaagccctgaaattttagatgaaattgagcgggtgagcgcaaaaatcgctctgcat
ttgggcgtagtagggctgttgaatatccaatttgctgtgcatcaaaattcgctgtatttg
attgaagtcaatcccagagccagccgaaccgtgccttttttaagcaaggctttaggcgtt
cctttagccaaagtggcgactagggttatggtgctagaagacttgaaagaagccttgaag
ttttatgataaaaaaaatatcgttggatattctaaaggcgtttataagcctaaaatgccc
cattttgtggctttaaaagaagcggttttcccttttaataaactttatggatcggatttg
attttagggcctgagatgaaaagcaccggcgaagtgatggggattgctagatctttaggg
cttgcatttttcaaggctcaaacggcttgctttaaccccattaaaaacaaggggcttatt
tttgtttctattaaagataaggataaagaagaagcatgcgttttaatgaagcgattggtt
cagttgggctttgaattgtgcgccacagaaggcacgcataaagctttggaaaaagccggg
gtaaagtctttaaaggtgcttaaaatctctgaaggccgccccaatatcatggatttgatg
atgaatggggaaatcagcatggctatcaacaccagcgatcacaaatctcaagatgacgct
aaactcatccgcgcttctgtgcttaaaaaccatgtgagttatttcacgactttaagcacg
atagaagtcttacttttagcgttagaagaaagctctaaagaagacgagttgttagcctta
caagattatttgaagtaa
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integrated database retrieval system
