Helicobacter pylori Rif1: C695_05595
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Entry
C695_05595 CDS
T02317
Name
(GenBank) multidrug resistance protein (msbA)
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
her
Helicobacter pylori Rif1
Pathway
her02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
her00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C695_05595
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
her02000
]
C695_05595
Enzymes [BR:
her01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
C695_05595
Transporters [BR:
her02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
C695_05595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_membrane_2
DEAD
RsgA_GTPase
AAA_22
AAA_16
AAA_29
ABC_ATPase
KAP_NTPase
nSTAND1
Ribosomal_L10
nSTAND3
AAA_5
cobW
NACHT
DUF87
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AFV43889
LinkDB
All DBs
Position
complement(1140100..1141755)
Genome browser
AA seq
551 aa
AA seq
DB search
MKLFFKRYSKYLKEHYKSFIVVLFSSLVVALSTAWGTYLVKPTLDEIFINKDTHMLKILP
FLVILAYLGKSGGMYLGTYFTNFIGLDIVKKIRNTMLESLLKMEMDFFNRTKKGELIARI
TNDIGLIRASLSNYLSESIREGLTIVGLVGVVIYQSPKLALVGLVIMPLAAIPISKIIRK
VKKLAKSHQESNAKITARLSEVFNNVEAIKISNGEKLEHKAFVKENEAFFKIGIKNIAVA
EISSPLMEFLGSIAIALVIYLGGNEVIRGHISVGAFFSFITALFMLYTPIKRLTRIVSNF
QEALVASDRIHEILEREPAIVDGELTLNNAIHTIEFKKVWLAYTLDNQERYVLNDISLKF
QQNEIIALKGESGSGKSSLVNLILRLYEPSKGEIFINDQKIESITQKSLREKISVVTQRV
FIFNGSVAENVAYGLEIDEVKIKECLKKAQALDFVEKMPHGIESVLDEFGANLSGGQRQR
IAIARALYKDVQVLIFDEATSALDNNTEESVKQSILELKQNRLIILISHNPSTLKLATKH
VKLEHGRLTEC
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
ttgaaactctttttcaagcgttattctaaataccttaaagagcattataaaagttttata
gtggttttattttcttctttagtggtggctttaagcacggcttgggggacttatttagtc
aagcccactttagatgaaatttttatcaataaagacactcacatgctcaaaatcctgcct
tttttagtgattttggcgtatttgggtaagagtgggggcatgtatttaggcacttatttc
accaacttcattgggcttgatattgtcaaaaaaatacgcaacactatgctagaaagcctt
cttaaaatggaaatggatttttttaacaggacgaaaaagggcgaattgatcgcaaggatc
accaatgatataggtttgattagagcgagtttgtccaattacctttcagagagcataaga
gaggggctaacgattgttgggttagtgggggtggtgatctatcaaagccctaaattagcg
ttagtggggttagtcatcatgccgttagctgctattcctatcagtaaaatcattcgtaag
gttaaaaaactcgctaaatcccatcaagagagtaacgccaaaatcaccgctcgtttgagt
gaagtttttaacaacgtggaagcgattaaaatctctaatggcgaaaaattagagcataag
gcttttgtgaaagaaaatgaagcgttttttaaaatcggtatcaaaaacatcgccgtggct
gaaatttcttcgcctttaatggagtttttaggttcaatcgctatagcgctagtgatttat
ttaggggggaatgaagtgattagaggccatattagcgtgggggcgtttttttctttcatt
acggccctttttatgctctatacgccgattaaacgcttaactaggattgtttctaatttt
caagaagccttagtcgctagcgacaggatccatgagattttagaaagagagccggctatt
gttgatggggaattgacgctaaataacgccatacacaccatagaatttaaaaaggtatgg
ctggcttatacgctagacaatcaagagcgttatgttttaaacgatattagtttgaagttc
caacaaaatgaaatcatcgctttaaagggcgaaagcgggagcggtaaaagctcattagtg
aatctgatcttacgcctttatgagccaagcaaaggcgaaattttcatcaacgatcaaaaa
atagagagcatcactcaaaaatccttaagagaaaagattagcgttgtcactcaaagggtg
tttatttttaacgggagcgtggctgaaaatgtggcgtatggtttagaaattgatgaggta
aaaatcaaagaatgcctaaaaaaagctcaagccttagattttgttgaaaaaatgcctcat
gggatagagagcgttttagatgaatttggcgctaatcttagcggcggccaacgccaaaga
atcgccattgcaagagctttgtataaagacgttcaagttttaatctttgatgaagccact
tccgctttagacaataacacagaagagagcgttaaacaaagcattttagaattgaaacaa
aaccgcttgatcattcttatttcgcacaacccaagcacgctaaaattagccactaagcat
gtgaaattagagcatgggcgtttgacagaatgctaa
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