Helicobacter pylori Rif1: C695_06610
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Entry
C695_06610 CDS
T02317
Symbol
trpA
Name
(GenBank) tryptophan synthase subunit alpha
KO
K01695
tryptophan synthase alpha chain [EC:
4.2.1.20
]
Organism
her
Helicobacter pylori Rif1
Pathway
her00260
Glycine, serine and threonine metabolism
her00400
Phenylalanine, tyrosine and tryptophan biosynthesis
her01100
Metabolic pathways
her01110
Biosynthesis of secondary metabolites
her01230
Biosynthesis of amino acids
Module
her_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
her00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
C695_06610 (trpA)
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
C695_06610 (trpA)
Enzymes [BR:
her01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
C695_06610 (trpA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trp_syntA
His_biosynth
Glyco_tran_WecG
Motif
Other DBs
NCBI-ProteinID:
AFV44090
LinkDB
All DBs
Position
complement(1352378..1353166)
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AA seq
262 aa
AA seq
DB search
MRYQNMFETLKKHEKMAFIPFVTLGDPNYELSFEIIKTLIISGVSALELGLAFSDPVADG
ITIQASHLRALKHASMAKNFQLLKKIRDYNHNIPIGLLAYANLIFSYGVDGFYAQAKECG
IDSVLIADMPLIEKELVIKSAQKHQIKQIFIASPNASSKDLEQVATHSQGYIYALARSGV
TGASRILENDSSAIIKTLKAFSPTPALLGFGISKKEHITNAKGMGADGVICGSALVKIIE
ENLNNENAMLEKIKGFIGGMIF
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgaggtatcaaaacatgtttgaaaccttaaaaaaacacgaaaaaatggcgtttatcccg
tttgtaaccttgggcgatcctaattatgaattgagttttgaaatcattaaaaccctaatt
attagcggggtgagcgctttagaattgggtcttgctttttctgatcctgtggcggatggc
attaccatacaagcgagccatttaagggcgttaaaacacgctagcatggctaaaaatttc
cagcttttaaaaaagattagagattacaaccacaatattcccatagggcttttagcgtat
gcgaatttaattttttcttatggcgttgatggcttttacgctcaagctaaagaatgcggt
atagatagcgttttaatagcggacatgcccctaatagaaaaagaattagtcatcaaatcc
gctcaaaaacaccaaatcaagcaaatctttatcgccagccccaatgcgagcagtaaagat
ttagaacaagtcgctacgcattcgcaaggctatatctacgctttagccaggagtggggtt
acaggggcgagccgtattttagagaatgattcgagtgctattattaaaaccttaaaagct
tttagccctaccccagccttactgggctttggcatttccaaaaaagaacacatcacaaac
gctaaaggcatgggtgctgatggcgtgatttgcggatcagcgttagtcaaaatcatagaa
gaaaatttaaacaatgaaaacgccatgctggaaaaaattaaagggtttataggaggaatg
attttttaa
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