Helicobacter pylori Rif1: C695_07650
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Entry
C695_07650 CDS
T02317
Symbol
tmk
Name
(GenBank) thymidylate kinase
KO
K00943
dTMP kinase [EC:
2.7.4.9
]
Organism
her
Helicobacter pylori Rif1
Pathway
her00240
Pyrimidine metabolism
her01100
Metabolic pathways
her01232
Nucleotide metabolism
Module
her_M00938
Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:
her00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
C695_07650 (tmk)
Enzymes [BR:
her01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.9 dTMP kinase
C695_07650 (tmk)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Thymidylate_kin
AAA_28
AAA_17
dNK
S_4TM
AAA_18
AAA_33
Motif
Other DBs
NCBI-ProteinID:
AFV44292
LinkDB
All DBs
Position
complement(1547349..1547924)
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AA seq
191 aa
AA seq
DB search
MYVVLEGVDGAGKSTQVELLKDRFKNALFTKEPGGTRMGESLRRIALNENISELARAFLF
LSDRAEHTESVIKPALKEKKLIISDRSLISGMAYSQFSSLELNLLATQSVLPAKIILLLI
DKEGLKQRLSLKSLDKIENQGIEKLLHIQQKLKTHAYALQEKFGCEVLELDAKESVKNLH
EKIAAFIKCAV
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtggtgttagaaggcgttgatggcgcgggcaaaagcactcaagtagaattatta
aaagaccggtttaaaaacgccctttttaccaaagagccaggggggacgagaatgggcgag
agtttaaggcgtatcgctttgaatgaaaacattagcgaattggctagagcgtttttattc
ttaagcgatagggctgagcatacagaaagcgtgataaaaccggcattgaaagaaaaaaag
ctcatcattagcgacaggagcttgatctctggcatggcttatagccaattttcaagctta
gaattaaacctgcttgccacccaaagcgtcttgcctgcaaaaatcattcttttactcata
gacaaagagggcttaaaacagcgcttaagccttaaaagtttagataaaatagaaaaccaa
ggcatagaaaaattacttcatatccagcaaaagctcaaaacccacgcttatgcgttacaa
gaaaaatttgggtgcgaagttttggaattagacgctaaagaaagcgttaaaaacttgcac
gaaaaaatcgccgcttttataaaatgcgctgtttaa
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