Helicobacter pylori Rif1: C695_07860
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Entry
C695_07860 CDS
T02317
Name
(GenBank) selenocysteine synthase
KO
K01042
L-seryl-tRNA(Ser) seleniumtransferase [EC:
2.9.1.1
]
Organism
her
Helicobacter pylori Rif1
Pathway
her00450
Selenocompound metabolism
her00970
Aminoacyl-tRNA biosynthesis
her01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
her00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
C695_07860
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
C695_07860
Enzymes [BR:
her01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.1 L-seryl-tRNASec selenium transferase
C695_07860
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Gene cluster
GFIT
Motif
Pfam:
SelA
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
AFV44334
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Position
1587322..1588482
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AA seq
386 aa
AA seq
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MAKETLEITPDLLKNPYQKIINASASVFDEKHGRSFFSTQFYEKIEPYLKEVLTHPIDLE
CDLNTAKKKNRLTPLKQLFKACFNTEEILIVNNNTSAIFLIANALAQEKEIIVSYGELVG
GDFNLKDILLNSGARLHLVGNINRAYLRDYRLALNENSKILFKTHNPHFKKDTPFKDLQT
LAKEHDLIDYYNLGDVDLSNRVALEEILALKPSLLSFSADKFFNSAQAGIIMGQKERVEA
LKNHPLYRVLRVGKITLTLLFCSLKAWINHQEDITIHALLNQTKDALLQKALKLYALLKP
LELNVSIASSFSKIGNLFGRELESFCVKIQPKNTRALNSEKLYLKLFQKGVIARISCEFV
CFEVFSLNEKDFEKIALVLEEILNKA
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagaaacgcttgaaataaccccggatcttttgaaaaacccttatcaaaaaatc
atcaatgcgagcgcgagcgtttttgatgaaaagcatgggcgatcgttttttagcacgcaa
ttttatgaaaaaattgaaccttatttaaaagaagttttaacccatcccattgatttagaa
tgcgatctaaacaccgctaaaaaaaagaaccgcttaacccctttaaaacagctttttaaa
gcgtgttttaacaccgaagaaattttgattgtgaataataacaccagcgcgattttcctc
atcgctaacgctttagcgcaagaaaaagaaatcattgtttcttatggcgaattagtgggg
ggggattttaaccttaaagatattttattaaatagtggggctaggctgcatttagtgggg
aatattaatcgcgcttatttaagggattaccgcttagccttgaatgaaaacagcaaaata
ctctttaaaacccacaacccccattttaaaaaagacacgccctttaaagatttacaaact
cttgctaaagagcatgatctcattgattattacaatttaggggatgtggatttgtcaaac
agagtggctttggaagaaattttagccctaaaaccatcgcttttaagctttagcgcggat
aaattctttaacagtgcgcaagcgggcattattatggggcaaaaagaacgggttgaagcg
ttaaaaaaccaccccctttatagagttttaagggtgggtaaaatcacgctcaccttgctt
ttttgcagcctaaaagcatggataaatcatcaagaagacattacaatccatgcgttattg
aaccaaactaaagacgcattattgcaaaaagccctcaaactctacgctcttttaaagcct
ttagaattgaatgtgagcatagcctctagcttttctaaaatagggaatttgtttggtagg
gaattagaatccttttgcgtgaaaatccagcccaaaaacacccgtgctttaaatagtgag
aaactttatttaaagcttttccaaaaaggcgttatcgcaaggatttcatgcgaattcgtg
tgctttgaagtctttagcttgaatgaaaaagattttgaaaaaatcgctctggttttagaa
gaaattcttaataaagcttaa
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