Helicobacter pylori Rif1: C695_07865
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Entry
C695_07865 CDS
T02317
Symbol
nusA
Name
(GenBank) transcription elongation factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
her
Helicobacter pylori Rif1
Brite
KEGG Orthology (KO) [BR:
her00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
her03021
]
C695_07865 (nusA)
03009 Ribosome biogenesis [BR:
her03009
]
C695_07865 (nusA)
Transcription machinery [BR:
her03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
C695_07865 (nusA)
Ribosome biogenesis [BR:
her03009
]
Prokaryotic type
rRNA transcription factors
C695_07865 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_5
NusA_N
KH_NusA_C
DUF2777
S1
Cyt_b-c1_8
Motif
Other DBs
NCBI-ProteinID:
AFV44335
LinkDB
All DBs
Position
1588584..1589771
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AA seq
395 aa
AA seq
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MEKISDLIECIAYEKNLPKEMISKVIQGCLLKMAQNELDPLARYLVVEENKQLQLIQLVE
VLEDGDERLVNDPSKYISLSKAKEMDPSVKIKDELSYSLSLESMKQGAINRLFKDLQYQL
EKALEDSHFEAFQKRLNSVLMGQVILVDHNQNTFIEIEQQFQGVLSMRHRIKGESFKVGD
SIKAVLTQVKRTKKGLLLELSRTTPKMLEALLELEVPEIKDKEIEIIHCARIPGNRAKVS
FFSHNARIDPIGAAVGVKGVRINAISNELNKENIDCIEYSNVPEIYITLALAPAKILSVE
IKKIPIEELNAEEKESIQERFIVNNHLQKAKVRLLDIEKSKAIGKGGVNVCLASMLTGYH
IEFETIPSVKENAENESEKETPKVGVEALESLFKN
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaatcagcgatcttatagaatgcattgcgtatgaaaaaaatttgcctaaagag
atgatttcaaaagtgattcaaggctgtttgttaaaaatggcgcaaaatgagttagacccc
ctagcacgctacttggtggttgaagaaaacaagcagctccagcttatccagttggtagaa
gttttagaagatggtgatgaaagattggttaacgacccttctaaatacatcagcctgtct
aaagccaaagaaatggatccaagcgttaagattaaagacgaattgtcctatagcttgagt
ttggagagcatgaaacaaggagcgatcaaccgcctttttaaagatttgcaataccagtta
gaaaaagcgttagaagacagccactttgaagcgtttcaaaagcgtcttaacagcgtttta
atggggcaagtgattttagtggatcacaaccaaaacacctttattgagattgagcagcaa
tttcagggcgttctttccatgcgccatcgcatcaagggcgagagttttaaagtgggcgat
agcattaaagcggttttaacgcaagtcaaacgcacgaaaaaaggcttattattagagctg
agccgcaccacccctaaaatgcttgaagctttgttggaattggaagtccctgaaattaaa
gacaaagaaattgaaatcatccattgtgcgcgaatcccaggcaacagagcgaaagtgagc
tttttttcccataacgctaggattgaccccataggcgcggctgtgggggttaagggcgtg
cgcattaatgcgatcagtaacgaattgaataaagaaaacattgattgcatagaatattct
aatgtgcctgaaatttacatcactctcgcactcgctccagccaaaattttaagcgttgaa
atcaaaaaaatccctatagaagaattgaatgctgaagaaaaagaatccattcaagagcgt
tttatcgtcaataaccatttgcaaaaggctaaagtgcgtttattggacattgaaaaatct
aaggctatcggtaagggcggggtgaatgtgtgcttagcgtccatgcttacaggctatcac
atagagtttgaaaccattcctagcgtgaaagaaaacgcagaaaatgaaagcgaaaaagaa
acgccaaaagtgggggtagaagctttagagtctttgtttaagaattaa
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