Helicobacter pylori Rif1: C695_08080
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Entry
C695_08080 CDS
T02317
Name
(GenBank) cell division protein (ftsI)
KO
K03587
cell division protein FtsI (penicillin-binding protein 3) [EC:
3.4.16.4
]
Organism
her
Helicobacter pylori Rif1
Pathway
her00550
Peptidoglycan biosynthesis
her01100
Metabolic pathways
her01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
her00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
C695_08080
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
C695_08080
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
her01011
]
C695_08080
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
her03036
]
C695_08080
Enzymes [BR:
her01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
C695_08080
Peptidoglycan biosynthesis and degradation proteins [BR:
her01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
C695_08080
Chromosome and associated proteins [BR:
her03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
C695_08080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
AFV44376
LinkDB
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Position
complement(1638011..1639858)
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AA seq
615 aa
AA seq
DB search
MDNRNIDPYFNPEQFLETQKYKGTVTALIFLLLFFIFLMVAFKKAFFAQANMPNLVMSKQ
DTAARGTIYSQDNYSLATSQTLFKLGFDTRFLNPDKEDFFIDFLSIYSNIPKKSLKDAIN
TKGYIILAYDLTPNMAANIRDLNKKFLAFGVFQNFKDAHDKVWQKQGLNIEVSGVSRHYP
YQNSLEPIIGYVQKQEEDKLTLTTGKKGVEKSQDHLLKAQQNGIRTGKRDVSFNFIQNHS
YTEVERLDGYEVYLSVPLKLQREIETLLDKTKDKLKAKEILVGIINPKSGEILSLASSKR
FNPNAIKTSDYESLNLSVAEKVFEPGSTIKPIVYSLLLDKNLINPKERIDLNHGYYQLGK
YTIKDDFIPSKKAVVEDILIQSSNVGMIKISKNLNPKDFYNGLLGYGFSQKTGIDLSLEA
TGKIPPLSAFKREVLKGSVSYGYGLNATFLQLLRAYAVFSNEGKLTTPYLVQRETAPNGD
IYIPSPKPTFQVISPKSARKMKETLIKVVRYGTGKNAQFEGLYIGGKTGTARVAKNGSYS
AQSYNSSFFGFAEDERQVFTIGVVILGSHGKEEYYASKIAAPIFKEITEILVRYNYLSPS
IAIQNALEKNRFKIK
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggataataggaatattgatccttacttcaacccagagcaatttttagaaacccaaaaa
tacaaaggcacggttacagcattaatctttttattgcttttttttatttttttaatggtg
gcttttaaaaaagctttttttgcccaagccaacatgcctaatctagtgatgagcaaacaa
gacactgcggctagggggactatctatagtcaagacaactacagcctagccacttcacaa
acccttttcaaactgggctttgatacaaggtttttaaacccggataaagaagattttttc
attgatttcctttctatttatagcaatatccctaaaaagtccttaaaagacgccatcaat
acaaaaggctatatcattctagcctatgatctcacgcccaatatggctgctaatattaga
gacttaaataagaaatttttagcctttggggtttttcaaaatttcaaagacgcgcacgat
aaggtgtggcaaaagcaagggctaaacattgaagtgagcggcgtttctaggcattaccct
tatcaaaatagcctagagccaatcattggctatgtgcaaaaacaagaagaagacaagctc
actttaactaccggtaaaaaaggcgttgaaaaatctcaagatcacttgcttaaagcccaa
caaaatggcataagaacaggcaaaagagacgtgagttttaactttatccaaaaccactct
tatacagaggttgaacgccttgatggctatgaggtgtatttgagcgttcctttaaaactc
caaagagaaattgaaaccctattggataaaactaaagacaaactcaaggctaaagaaatc
ctagtgggtatcattaaccctaaaagcggggaaattttatcgctagcttcaagcaagcgc
ttcaatcctaatgcgattaaaaccagcgattatgaaagcttgaatttgagcgttgctgaa
aaggtttttgagccaggcagcacgatcaaacccattgtttattccttgctgttagacaag
aatttgatcaaccccaaagaacgcattgatttaaaccatggctattaccaattaggaaaa
tacaccattaaagacgactttatccccagtaaaaaagccgttgtggaagacattttgatc
caatctagcaatgtgggcatgataaaaatcagtaaaaacttaaacccaaaggatttctat
aatgggcttttaggctatggattttctcaaaaaaccggcattgatttatctctagaagcc
acaggaaagatccctcctttgtccgctttcaagcgtgaagtgttaaaggggagcgtttct
tatggctatgggctgaacgcgacttttttgcagcttttaagggcttatgcggtgttttct
aatgaaggcaaattgactaccccctatttagtgcaacgagaaaccgcccctaatggcgat
atttacatccctagccccaaacccacctttcaagtcattagcccaaaaagcgctaggaaa
atgaaagaaaccttaatcaaagtagtgcgttatggcacaggcaaaaacgctcaatttgaa
gggctatacatagggggcaaaaccggcacggctagggtcgctaaaaacgggagttatagc
gcgcagtcctacaacagctctttttttgggtttgctgaagatgaaaggcaggtttttact
atcggcgtggttatcttaggttcgcatggcaaggaagaatattacgccagcaagattgca
gcccccatttttaaagaaatcaccgaaattttagtgcgttacaattatctatcgccctct
attgcgattcaaaacgcgctcgagaaaaaccgctttaagataaaataa
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