Helicobacter pylori Rif1: C695_08160
Help
Entry
C695_08160 CDS
T02317
Name
(GenBank) regulatory protein DniR
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
her
Helicobacter pylori Rif1
Brite
KEGG Orthology (KO) [BR:
her00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
her01011
]
C695_08160
Enzymes [BR:
her01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
C695_08160
Peptidoglycan biosynthesis and degradation proteins [BR:
her01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
C695_08160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LysM3_LYK4_5
LysM1_NFP_LYK
SLT_2
Phage_lysozyme2
HTH_Mga
Motif
Other DBs
NCBI-ProteinID:
AFV44392
LinkDB
All DBs
Position
complement(1652667..1653773)
Genome browser
AA seq
368 aa
AA seq
DB search
MKCFSQKWLVFFVTLLLASLGHAKMAFESDIDTKALEAFGVNAGFLSQMPNALKKMNKEE
EWKRLVKRFDVNYQFIPIIKNMLIEASVPQEFLFLAMAESKFSSRAYSRKKAVGIWQFMP
STAKELGLKVNHYIDERRDPIKSTQAAITYLKRLYKQTGEWYLVAMAYNYGLRKVQNAIK
AAGTSDIKILLDEDKKYLPKETREYIRSILSLALKFNSLDNLKDKEYLLNRGARVSLVGV
PFKRRASLVQVAKNLNLSLETLKSYNHQFRYNILPSKDPTYTIYIPYEKLALFKQRQIKQ
NKNIQASSKSPFITHVVLPKETLSSIAKRYQVSISNIQLANDLKDSNIFIHQRLIIPTNK
KLLATREF
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgttttagtcaaaaatggttggttttttttgttacccttttattggcttcttta
ggccatgcgaaaatggcttttgaatccgatattgacaccaaagcgctagaggcttttggg
gttaatgcgggctttttatcccaaatgcccaacgctttaaaaaaaatgaataaagaagaa
gaatggaagagacttgtcaaaagatttgatgtgaattaccagttcatccccatcattaaa
aacatgctcatagaagcgagcgtgccgcaagaatttttatttttagccatggccgagtct
aaattttcatcaagggcttatagcaggaaaaaagcggtagggatttggcaattcatgcca
agcacggctaaagaattagggcttaaggtcaatcattacattgatgaaagaagagatccc
attaaaagcactcaagcggcgatcacttatttgaaacggctctacaagcaaaccggagag
tggtatttggtcgctatggcgtataattacggcttacgcaaggttcaaaacgctattaaa
gccgccggcacttcggacattaaaattttgttggatgaagataagaaatacctccctaaa
gaaacacgagagtatatccgctccattctaagcctagcgttaaaattcaacagcctagac
aacctcaaagataaagaatatctgctcaatcgtggggcgagggtgagtttagtgggcgtc
ccgtttaaaaggcgtgcttctttagtccaagtagccaaaaatttgaatttgagtttggaa
accttaaaatcctacaaccaccaattccgttataacattctgccttctaaagaccccact
tataccatttatatcccttatgaaaaactcgctcttttcaaacaacgccagatcaaacaa
aataaaaacattcaagccagttcaaaaagcccttttatcacccatgtggtcttacctaaa
gaaaccctatcttctatcgctaaacgctatcaagtcagtatttccaatatccaattagcc
aatgatctcaaagattctaatatttttatccaccagcgtttaatcatccccaccaacaaa
aaattactcgctacaagggaattttaa
DBGET
integrated database retrieval system
