Helicobacter pylori SouthAfrica7: HPSA_00925
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Entry
HPSA_00925 CDS
T01921
Symbol
lysS
Name
(GenBank) lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
hes
Helicobacter pylori SouthAfrica7
Pathway
hes00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hes00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HPSA_00925 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hes01007
]
HPSA_00925 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hes03016
]
HPSA_00925 (lysS)
Enzymes [BR:
hes01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
HPSA_00925 (lysS)
Amino acid related enzymes [BR:
hes01007
]
Aminoacyl-tRNA synthetase
Class II (A)
HPSA_00925 (lysS)
Transfer RNA biogenesis [BR:
hes03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HPSA_00925 (lysS)
Prokaryotic type
Other AARSs
HPSA_00925 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
ADU84209
UniProt:
E8QUB1
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All DBs
Position
183052..184557
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AA seq
501 aa
AA seq
DB search
MFSNQYIQQRIHKANSLREEGKNPYKNGLKRSLTNAAFLEKYAYVKDLEEPKDKEKGESI
VGRVKLLRLMGKACFIKVEDESAILQAYVSQNELNDEFKSLKKHLEVGDIVLVKGFPFAT
KTGELSIHALEFHILSKTIVPLPEKFHGLSDIELRYRQRYLDLIVNPSVKDVFKKRSLIV
SSVRKFFEMEGFLEVETPMMHPIPGGANARPFITYHNALEIERYLRIAPELYLKRLIVGG
FEAVFEINRNFRNEGMDHSHNPEFTMIEFYWAYHTYEDLIELSKRLFDYLLKTLNLDSKI
IYNDMEVDFNQTSVISYLDALETIGGISKEILEKEDKLLAYLLEQGVKVESNLTHGKLLA
EAFGHFVEHKLIHPTFVTQYPIEISPLARRNDSNPNIADRFELFIAGKEIANGFSELNDP
LDQLERFKSQVAEKEKGDEEAQYMDEDYVWALAHGMPPTAGQGIGIDRLVMLLTGAKSIK
DVILFPAMRPVKNDFNVESGE
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgttttctaaccaatacatccaacaacgcattcataaagccaacagcttgagagaagaa
gggaaaaacccttataaaaatggcttgaaacgaagcctgacaaatgccgcttttttagaa
aaatacgcttatgtgaaggatttagaagagcctaaagacaaagaaaaaggcgagagtatt
gtagggagggtcaagctcttgcgtttaatgggtaaggcatgttttattaaagttgaagat
gaaagcgcgattttacaagcctatgtttcgcaaaatgaattgaacgatgaatttaaaagc
ttaaaaaagcatttagaagtgggcgatattgtgttggtgaaaggctttcctttcgccact
aaaaccggtgaattaagcattcatgccctagaatttcacattttaagcaaaaccattgtg
ccattgcctgaaaagtttcatggattgagcgatatagagttgcgttaccgccagcgctac
ttggatttgatagtcaatcccagcgttaaagatgtgttcaaaaagcgcagtttgattgtc
tctagcgtgcggaaattctttgaaatggaagggtttttggaagtggaaaccccgatgatg
caccccattcctggcggggcgaatgcaaggccttttatcacttatcataacgctttagaa
attgaaaggtatttgaggatcgccccagaattataccttaaacgcttgatcgtggggggt
tttgaagcggtgtttgaaatcaatcgtaattttaggaatgaaggcatggatcatagccat
aaccccgaatttacgatgattgagttttattgggcgtatcacacttatgaagatctgatt
gaattaagcaagaggttgtttgactacttgctaaagactttaaacttagattcaaaaatc
atttataacgacatggaagtggatttcaatcaaacgagcgtgatttcctatttagacgct
ttagaaacaatagggggtattagtaaggagattttagaaaaagaagacaaacttttggct
tatttgttagagcaaggcgtcaaagtagagtccaatctcactcatggcaaattgctcgct
gaagcgtttggtcattttgtggagcataaactcattcaccccacttttgtaacgcaatac
cctattgagattagcccgctagccagacgcaacgatagtaaccctaacattgctgataga
tttgaattgtttattgcaggaaaggaaatcgctaacggctttagcgagttgaatgacccc
ttagatcaattagagcgctttaaaagtcaagtagccgaaaaagaaaaaggcgatgaagag
gcccaatacatggacgaagattatgtgtgggcattagctcatggaatgcctcccactgca
gggcaaggcataggtattgacagattggtgatgttgctcactggggctaaaagcattaaa
gatgtgattttattcccagcgatgcgtcctgttaaaaacgattttaatgttgaaagtgga
gaataa
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