KEGG   Helicobacter pylori SouthAfrica7: HPSA_01130
Entry
HPSA_01130        CDS       T01921                                 
Name
(GenBank) DNA repair protein RadA
  KO
K04485  DNA repair protein RadA/Sms
Organism
hes  Helicobacter pylori SouthAfrica7
Brite
KEGG Orthology (KO) [BR:hes00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hes03400]
    HPSA_01130
DNA repair and recombination proteins [BR:hes03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     HPSA_01130
SSDB
Motif
Pfam: ATPase Zn_ribbon_LapB AAA_25 DnaB_C ChlI AAA_24 Lon_C RecA NTPase_1 AAA_14 AAA_16 AAA_5 AAA_31 NACHT ATPase_2 ABC_tran SLFN-g3_helicase nSTAND3 CbiA AAA_22 DAP3 ResIII zf-C2H2_7th_ZNF462 NPHP3_N DUF7129 ArsA_ATPase SRP54 AAA AAA_30 MeaB LexA_DNA_bind GvpD_P-loop RsgA_GTPase Zeta_toxin KTI12 AAA_19
Other DBs
NCBI-ProteinID: ADU84250
UniProt: E8QUN2
LinkDB
Position
225341..226687
AA seq 448 aa
MAKKTSLFECQHCGFTSPKWLGKCIQCNAWESFIELNQAQKEVLNTLKNPLSKAQKSVSI
VEIEHEEVVKFSSTQSELDIVLGGGIAKGGLYLVGGSPGVGKSTLLLKVASGLAKNKQKV
LYVSGEESLSQIKMRATRLDCIEKELYLLNEINWPVIKSNIESEDYFACVIDSIQTLYSP
EISSAPGSISQVREITFELMRLAKTRDIAIFIIGHITKEGSIAGPRVLEHMVDSVLYFEG
DPSRELRILRSFKNRFGPTSEIGLFEMKEQGLVSAKEASSLFFSKEEPMEGSAITITLEG
SRALILEIQALVSECSFGAPKRLANGFDTNRLNMLIALLEKKLEIPLNRHDVFINVSGGI
KISEPACDLAVIASILSSFKNRKIDNKTAFLGEVSLNGRILEAPNLNARLKEMENYGFLK
AILPKKPSQKTSIKCYEANVVGKIVEWM
NT seq 1347 nt   +upstreamnt  +downstreamnt
ttggctaaaaaaacttctttatttgagtgtcagcattgcggttttacaagccccaaatgg
ctaggcaagtgcattcaatgcaacgcatgggagagttttatagaattgaaccaagcccaa
aaagaagttttaaacacgcttaaaaacccgctttcaaaagcgcaaaaaagcgtttctatc
gtggaaattgaacatgaagaagtggtgaaattttcttccactcaaagcgagttggatatt
gttttaggtggggggattgctaaaggagggctgtatttagtgggggggagtcctggggtg
gggaaatccactttgcttttaaaagtggcttctgggttagccaaaaataagcaaaaggtt
ttgtatgtgagcggtgaagagagcttgagccagattaaaatgcgagccactagattagat
tgcatagaaaaagaattgtatttgctcaatgaaatcaattggcctgtgattaaatccaat
attgaaagcgaggattattttgcttgcgtgattgattctatccaaacgctttattcgcca
gaaatttcttcagcgcccggctctatttcgcaagtgcgagagatcacttttgagctcatg
cgtttggcaaagacaagagatattgctatttttatcatcggccatatcactaaagaaggg
agcattgcaggccctagagtgttagagcatatggtggatagcgtgctgtattttgaaggc
gatccgagtagggaattaaggattttaaggagttttaaaaaccgctttggccctacgagt
gaaatcggcttgtttgaaatgaaagagcagggtttggtgagcgccaaagaagcttcaagt
ttgtttttttctaaagaagagcctatggaagggagtgccattaccattactttagaaggc
tcaagggcgttgattttagagattcaggcgttggtgagcgagtgcagttttggagcgccc
aaacgattagcgaacgggtttgacactaaccgccttaacatgctcattgctttgttagaa
aaaaagctagaaatccccttaaaccgccatgatgtgttcattaatgtgagcgggggcatt
aagattagcgagccggcttgcgatttggcagtcattgccagcatcctttcaagctttaaa
aacagaaaaattgacaataaaaccgcttttttgggtgaagtgagcttgaatggcaggatt
ttagaagcccctaatttgaacgccaggttgaaagaaatggaaaattacgggtttttaaaa
gccattttgcctaaaaaacccagtcaaaaaacttccatcaagtgctatgaggccaatgtg
gtgggtaagattgttgagtggatgtag

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