Helicobacter pylori SouthAfrica7: HPSA_04485
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Entry
HPSA_04485 CDS
T01921
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hes
Helicobacter pylori SouthAfrica7
Brite
KEGG Orthology (KO) [BR:
hes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hes03016
]
HPSA_04485 (truD)
Enzymes [BR:
hes01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
HPSA_04485 (truD)
Transfer RNA biogenesis [BR:
hes03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HPSA_04485 (truD)
Prokaryotic type
HPSA_04485 (truD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
GutM
Motif
Other DBs
NCBI-ProteinID:
ADU84881
UniProt:
E8QSB7
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All DBs
Position
915995..917140
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AA seq
381 aa
AA seq
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MNLNFMPLLHAYNHASIDFHFNSSARDFCVHEVPLYEFSNTGEHAIIQVRKSGLSTLEML
QIFSQILGVKIAELGYAGLKDKNALTTQFVSLPKKYAPLLEKNTSNFQERNLKILSLNYH
HNKIKLGHLKGNRFFMRFKKMTPLNAHKTEQVLEQIAQFGMPNYFGSQRFGKFNDNHQEG
LKILQNETKFKNQKLNAFLISSYQSYLFNSLLSKRLEISKIISDFSLKEGLEFFKQKHLS
IHSNALKALKNQNHPFKILEGDVMCHYPYGKFFDALELEKESKRFLKKEAAPTGLLDGKK
ALYAKNLSLEIEKEFQNPILSNHAKTLGSRRFFWVFAKNLTSKYIKEKAQFELEFYLPKG
SYASALLKEIKHEKGENNDAF
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaaactttatgcccttattgcatgcttataaccatgcgagcattgattttcat
ttcaattctagcgctagggatttttgcgtgcatgaagtgcctttgtatgaatttagcaac
acgggcgaacatgccattattcaagtgaggaaaagcggtttaagcactttagaaatgctt
caaattttttctcaaattttaggggtaaaaatcgccgaattgggttatgcaggcttgaaa
gataaaaacgcgctaacgactcaatttgtctcactccctaaaaaatacgcccccttacta
gaaaaaaacacgagcaactttcaagaaagaaaccttaagattttatctttgaattaccac
cacaataagatcaaattagggcatttaaaggggaatcgcttttttatgcgttttaagaaa
atgacccccctaaacgctcacaaaacggagcaggttttagaacaaattgcgcagtttggc
atgccgaattattttggctcacaacgcttcgggaagtttaacgacaaccaccaagagggt
ttaaaaatcttacaaaatgaaacgaaattcaagaatcaaaaattaaacgctttcttaatc
tcaagctatcaaagttatttgttcaattcgcttttaagcaaacgattagaaatcagtaaa
atcatcagcgatttcagcttaaaagagggtttagagttttttaaacaaaaacatttaagt
atccattcaaacgccctaaaagcccttaaaaaccaaaatcacccctttaaaatcctagaa
ggcgatgtgatgtgccactacccttatgggaagttttttgacgctttagaattagaaaaa
gaaagcaaaaggtttttaaaaaaagaagctgcacctaccgggttattagacggcaaaaag
gctctttatgcaaaaaatttgagtttggaaattgaaaaagaattccaaaaccccatttta
agtaaccatgctaaaacgctaggctctaggcggtttttttgggtgtttgcaaaaaatttg
acttccaaatatatcaaagaaaaagcgcaatttgaattggaattttacttgcctaaaggg
agttatgcgagcgcgttgctcaaagaaatcaagcatgagaaaggagaaaataacgatgca
ttttga
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