Helicobacter pylori SouthAfrica7: HPSA_04720
Help
Entry
HPSA_04720 CDS
T01921
Name
(GenBank) topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hes
Helicobacter pylori SouthAfrica7
Brite
KEGG Orthology (KO) [BR:
hes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hes03032
]
HPSA_04720
03400 DNA repair and recombination proteins [BR:
hes03400
]
HPSA_04720
Enzymes [BR:
hes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HPSA_04720
DNA replication proteins [BR:
hes03032
]
Prokaryotic type
DNA Topoisomerases
HPSA_04720
DNA repair and recombination proteins [BR:
hes03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HPSA_04720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Terpene_syn_C_2
SpecificRecomb
Motif
Other DBs
NCBI-ProteinID:
ADU84926
UniProt:
E8QSG2
LinkDB
All DBs
Position
complement(966050..967993)
Genome browser
AA seq
647 aa
AA seq
DB search
MFNMYKNCVFIIESPNKIAKIKELTGSSFVFATGGHFVELVNIEVGKEFNPIFEIKKSTD
KKKDKSTHINHMINQCKDKVVYIATDPDREGYGIGYKFYEKIKNLAKTIYRTEFHEITKS
GVEKGLNNAVLFSQSNLNLYYSWLGRIVSDQFVGFTLTPYLRKNIKNFEVSAGRVQTPAL
SILVELDRKIQAFEQKNIDEKLSYSIEAIIDVLGSQISITLVEENKRKVFETKELAQNFL
NDLKNNLNPLAFLDTIEQKDKEKAPPKPFTTSNLLKDGVRILEMGVKQIQEHAQKLFEAG
LITYIRTDSEALSKEYLQEHKAFFENIYPSVYEYREYRAGKNSQAEAHEAIRITHPHCYE
DLKKVCEKHNITDIDDLKVYTLIFFNTICSQSKNAIYENTTLNFKVKTHRFKCSFSKLKS
KGFKAIKDLEEEKKDEEEIESDLDFSSLQLKTQMPILDFNIKELKAKAPSPYTESTFIAM
METYGIGRPSTYTSVFEILKNKNYITLEGKNRKITPTALGKSIVDFFLNDNQTQWIAISK
VDDSFTKKLEEMLDMIIKDGKSAYLDLMQNIQKKLGTEISNLYRNNSNDNASATKKETIP
PTEKQLNFVETIEKTLQIKASDMTKKDKFTCMKFIEEHSKKMPKKDK
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgttcaatatgtataaaaactgcgtatttatcatagaaagtcccaataaaatcgctaaa
atcaaagaattaacaggaagttcatttgtttttgcgactggtgggcattttgttgagcta
gtcaatattgaagtgggtaaagaatttaaccctatttttgaaatcaaaaaaagcacggat
aagaaaaaggataaatccactcatatcaaccatatgataaatcaatgtaaagataaagtg
gtctatattgctactgaccctgatagagagggttatggcataggttataaattttatgaa
aaaatcaaaaatctggctaaaacaatttatcgcacggagtttcatgaaatcacaaaaagc
ggtgtagaaaaaggcttgaataatgctgtgctattttctcaaagcaatctcaatctctat
tatagttggttaggtaggattgtaagcgatcaatttgtaggctttactttaacgccttat
ttgcgcaaaaatattaagaattttgaagtgagtgctggtagggttcaaacccctgctctt
tccattttagtagaattagacagaaaaatccaagcctttgagcaaaagaatattgatgag
aaattaagttatagtatagaagctattattgatgtgttaggttctcaaatctctattact
ttagtagaagagaataaaaggaaagtgtttgagaccaaagaattagcccaaaacttttta
aatgacttaaaaaacaatcttaacccattagcttttttagacacaatagagcaaaaagat
aaagaaaaagctccacctaaacctttcaccacttctaatcttttaaaagatggggttaga
attttagaaatgggcgttaagcaaatccaagaacacgcccaaaaactttttgaagctggg
ttgattacttatattcgcactgatagcgaagcgttaagtaaagaatacttgcaagagcat
aaagcgttttttgaaaatatttatcctagcgtgtatgaatacagagaatatagggctggt
aaaaattcgcaagctgaagcgcatgaggctataagaattacacaccctcactgctatgaa
gatcttaagaaagtgtgtgaaaaacacaatattacagatattgatgatttaaaagtttat
acgcttatcttttttaacaccatttgttctcaaagtaaaaacgctatttatgaaaacaca
actttaaattttaaagtaaaaacgcacagatttaaatgcagttttagcaaactcaaatct
aaaggctttaaagcgattaaagacttagaagaagaaaagaaagatgaagaagagattgaa
agcgatcttgatttttctagcttgcaattaaaaactcaaatgcctattttagattttaat
atcaaagaactaaaagctaaagctcctagcccttatacagaaagcacttttattgcaatg
atggaaacctatggcataggaagacctagcacttatacaagtgtatttgagatcctaaaa
aacaaaaattacattacattagagggcaaaaatagaaagattacgcccacagctcttggt
aaaagcattgttgatttcttcttgaatgataaccaaacacaatggattgctatttctaaa
gtggatgatagttttacaaaaaaattagaagaaatgctagatatgattataaaagatggt
aaaagcgcttatcttgatttaatgcaaaatatccaaaagaaattaggcacagaaatttct
aacttatatagaaataatagcaatgacaacgcttctgctacaaaaaaagaaacgatacct
ccaactgaaaaacaacttaattttgtagaaaccatagaaaaaactcttcaaataaaagct
tctgatatgacaaaaaaagacaagtttacatgcatgaagtttatagaagaacatagtaaa
aaaatgcccaaaaaggataagtaa
DBGET
integrated database retrieval system
