Helicobacter pylori SouthAfrica7: HPSA_06110
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Entry
HPSA_06110 CDS
T01921
Name
(GenBank) outer membrane protein BabA
KO
K15847
outer membrane protein BabA
Organism
hes
Helicobacter pylori SouthAfrica7
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SabA_adhesion
HP_OMP
RmuC
Baculo_F
Motif
Other DBs
NCBI-ProteinID:
ADU85190
UniProt:
E8QT76
LinkDB
All DBs
Position
complement(1256041..1258143)
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AA seq
700 aa
AA seq
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MVKNTKGIQQLSDNYENLNNLLTRYSTLNTLIKLSADPSAINAVRENLGASAKNLIGDTK
NSPAYQAVLLAINAAVGFWNVLGYATQCGGNANGQKSTSSTTVFDNEPGYRSTSITCSLN
GYTPGYYGPMSIENFKKLNEAYQILQTALKQGLPTLNEKNGTVSVTYSYKCAGEGNNNCD
ILSSNRNGGTKTETQTIDGKTVNTTISSKVVDWDASGNTLHASYTDITTKMENVPDNAQA
LLAQASTLINTINEACPYFSVTNKSGGPQMEPTKGKLCGFEQEISAIQKMITDAQELVNQ
TSVINNHEQTTPVGNNNGKPFNPFTDASFAQGMLANASAQAKMLDLAHQVGQTINPDRLT
GSFKNFVTGFLATCNNPSTAGTGGTQGSTPGTVTTQTFASGCAYVEQTITNLSNSIAHFG
TQEQQIQQAENIADTLVNFKSRYNELGNTYNSITTALSNIPNAQSLQNAVSKKNNPYSPQ
GIETNYYLNQNTYNQIQTINQELGRNPFRKVGIVSSQTNNGAMNGIGIQVGYKQFFGQKR
KWGARYYGFFDYNHAFIKSSFFNSASDVWTYGFGADALYNFINDKATNFLGKNNKLSVGL
FGGIALAGTSWLNSEYVNLATVNNVYNAKLNVANFQFLFNMGVRMNLARPKKKGSDHVAQ
HGIELGLKIPTINTNYYSFMGAELKYRRLYSVYLNYVFAY
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaaaacaccaaaggcatccaacagctttcagacaattatgaaaacttgaacaac
cttttgacccgatacagcaccctaaacacccttatcaaattatccgctgacccgagcgcg
attaacgcggtgcgtgaaaatctgggcgcgagcgcgaagaatttgattggcgataccaaa
aattccccggcctatcaagccgtgcttttagcgatcaatgcggcggtagggttttggaat
gtcttaggctatgctacgcaatgtgggggtaatgcaaatggtcaaaaaagcacttcttca
accaccgtctttgacaacgagccagggtatcgatccacttccatcacttgttctttgaac
gggtatactcctggatactacggccctatgagtattgagaattttaaaaagctcaacgaa
gcctatcagatcttgcaaacggctttaaaacaaggcttaccgacgctgaatgaaaagaac
gggacagtgagcgtaacttatagctataaatgcgcaggagaagggaataataactgtgat
atattaagctccaatagaaatggcggaacaaaaaccgaaacccaaaccatagatggcaaa
accgtgaacaccacgatcagttcaaaagttgttgattgggacgcatctggtaatacgcta
cacgcaagctacactgatattactaccaaaatggaaaatgtccccgacaacgcgcaagcg
ctgttagcgcaagcgagcacgctcattaacaccatcaacgaagcatgcccgtattttagt
gtaactaataagagtggtggtccacagatggaaccgactaaagggaagttgtgcggtttt
gaacaagaaatcagcgcgatccaaaagatgatcacggacgcgcaagagctggtcaatcaa
acgagcgtcattaataaccatgaacaaacaaccccggtaggcaataataatggcaagcct
ttcaaccctttcacggacgcaagttttgcgcaaggcatgctcgctaacgctagcgcgcaa
gccaaaatgctcgatctagcccatcaagtggggcaaaccattaaccctgaccgtcttact
gggtcttttaaaaattttgttacaggctttttagccacatgcaacaacccctcaacagct
ggcactggcggcacacaaggttcaactccaggcacagtgaccactcaaactttcgcttcc
ggctgcgcctatgtggaacaaaccataacgaacttaagcaacagcatcgctcactttggc
actcaagagcagcaaatacagcaagcagagaatatcgctgacactttagtgaatttcaaa
tcccgatacaatgaattaggcaacacctataacagcatcaccaccgcgctctctaatatc
cctaacgcgcaaagcttgcaaaatgcggtgagcaaaaagaataacccctatagcccgcaa
ggcatagaaaccaactactacctcaatcaaaatacttacaaccaaatccaaaccatcaac
caagaactcgggcgtaacccctttaggaaagtgggtattgttagttctcaaaccaataac
ggcgcgatgaatgggatcggtatccaggtgggctacaaacaattctttgggcaaaaaaga
aaatggggcgctaggtattacggcttttttgactacaaccatgcgttcatcaaatccagc
tttttcaactcggcttctgatgtatggacttatggttttggagcggacgccctctataac
ttcatcaacgataaagccaccaacttcttaggcaaaaacaacaagctttctgtggggctt
tttggcgggattgcactagcgggcacttcttggcttaattctgaatacgtgaatttagcc
accgtgaataacgtctataacgctaaactgaacgtggcaaacttccaattcttattcaac
atgggagtgaggatgaatttagccagacctaagaaaaaaggcagcgatcatgtggcgcaa
catgggattgaactagggcttaaaatccccaccatcaacaccaactactattcctttatg
ggcgctgagcttaaataccgcagactctatagcgtgtatctcaactatgtgtttgcgtat
taa
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