Helicobacter pylori SouthAfrica7: HPSA_07040
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Entry
HPSA_07040 CDS
T01921
Name
(GenBank) seryl-tRNA synthetase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
hes
Helicobacter pylori SouthAfrica7
Pathway
hes00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hes00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HPSA_07040
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hes01007
]
HPSA_07040
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hes03016
]
HPSA_07040
Enzymes [BR:
hes01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
HPSA_07040
Amino acid related enzymes [BR:
hes01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
HPSA_07040
Transfer RNA biogenesis [BR:
hes03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
HPSA_07040
Prokaryotic type
HPSA_07040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Surfac_D-trimer
YidB
GAS
SOGA
Motif
Other DBs
NCBI-ProteinID:
ADU85362
UniProt:
E8QTZ8
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All DBs
Position
complement(1421609..1422856)
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AA seq
415 aa
AA seq
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MIDKKLLLQDFDKVAHSLKKRNSAMDDELERLREIITHYKKQLIELESLQAFQNKVSKEF
GIKMAQKVGASDLKKELENNKIKLNELSKSVSELEQEIDSKLSIIPNLVDEKTPLGTSEE
DNVEIKKILTPRNFTFTPKEHFELAQKNGWIDFESGVKLAKSRFSVIRGFGAKVYRALIH
LMLDFNEKNGFEIIYTPALVNEKMLFGTGQLPKFKEDVFKIENENLYLIPTSEVTLTNLY
HDTIISVEKLPIKMTAHTPCFRSEAGSAGKDTRGMIRQHQFDKVELVAITHPKESDAMQE
YMLESASAILKALELPHRFVQLCSGDLGFSASNTIDIEVWLPGQNCYREISSVSNTRDFQ
ARRAKIRFKENQKNQLAHTLNGSSLAVGRTMVALMENHQQADGSIHIPKALEKYL
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgattgataagaaacttttattgcaagattttgataaggtggctcattctttaaaaaag
cgtaacagcgcgatggatgatgagctagagcgtttgcgcgaaatcatcacgcattataaa
aaacaactcattgagttagaaagcttgcaagccttccaaaacaaggtttctaaagaattt
ggtatcaaaatggctcaaaaagtgggtgcaagcgatctcaaaaaagagctagaaaacaat
aaaatcaaattgaatgagctttctaaaagcgtgagcgagttggagcaagaaattgattca
aagctttccataatccctaatctagtggatgaaaaaacccctttaggcacaagcgaagag
gataatgtagaaattaaaaaaattttaaccccaagaaatttcactttcacgcctaaagag
cattttgaactcgctcaaaaaaatggctggattgattttgaaagcggcgtgaaactcgct
aaaagccgtttttcagtcattaggggttttggggctaaagtttatcgcgcgctcattcat
ttaatgttggattttaacgaaaaaaacggctttgaaatcatctacacgccggctttagtg
aatgaaaaaatgctttttgggaccgggcaattacccaaattcaaagaagacgtttttaaa
atagaaaatgaaaatttgtatctgatccccacttctgaagtaacgctcaccaatctatac
cacgacacgatcattagcgttgaaaaactccccattaaaatgaccgcgcacacgccttgt
ttcaggagcgaagcagggagcgcgggcaaggacacaaggggaatgataaggcaacaccaa
tttgacaaggtggaattagtggctatcacgcaccctaaagaaagcgatgccatgcaagaa
tatatgctagagagcgcgagcgcgattttaaaggcgttggaattgcctcaccggttcgtg
caattatgcagtggggatttgggctttagcgcaagcaacacgatagatattgaagtgtgg
ctgcccgggcaaaattgttacagagaaatcagctccgtgtctaacacgagggattttcaa
gccaggcgggccaaaatccgcttcaaggaaaatcaaaaaaaccaattagcgcacaccttg
aatggttcttctttagcggtaggcaggacgatggtcgctttaatggaaaaccaccagcaa
gcggatgggagcattcatattcctaaggcgttagaaaaatacctttaa
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