Helicobacter pylori SouthAfrica7: HPSA_07420
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Entry
HPSA_07420 CDS
T01921
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hes
Helicobacter pylori SouthAfrica7
Pathway
hes03030
DNA replication
hes03430
Mismatch repair
hes03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HPSA_07420
03430 Mismatch repair
HPSA_07420
03440 Homologous recombination
HPSA_07420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hes03032
]
HPSA_07420
03400 DNA repair and recombination proteins [BR:
hes03400
]
HPSA_07420
Enzymes [BR:
hes01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HPSA_07420
DNA replication proteins [BR:
hes03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HPSA_07420
DNA repair and recombination proteins [BR:
hes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HPSA_07420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ADU85433
UniProt:
E8QUF1
LinkDB
All DBs
Position
complement(1503808..1504671)
Genome browser
AA seq
287 aa
AA seq
DB search
MSINLLHKDIQALIARLKNQDLSLGMLEKSLSRLIYDEINLEYLKACGLNFIETSENLIT
LKNLKTPLKDEVFSFIDLETTGSCPIKHEILEIGAVQVSGGKIINRFETLVKVKSVPDYI
SDLTGIAYEDTLNAPSVYEALQELRLFLGNSVFVAHNANFDYNFLGRYFVEKLHCPLLNL
KLCTLDLSRRAILSMRYSLSFLKELLGFGIEVSHRAYADALASYKLFEICLLNLPNYVKT
TMDLIDFSKCANALIKRPPRARHQEIPSPFPLFERTKGLLNTIKATS
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgtcaataaacctcttgcataaagatattcaagccctaatcgctcgcttaaaaaaccag
gatttaagcttgggcatgctagaaaagtcgctctctcgccttatctatgatgaaatcaat
ttggaatatttaaaagcgtgcgggcttaatttcatagaaacaagcgaaaatttaatcacg
ctcaaaaaccttaaaaccccccttaaagatgaagttttttcctttattgatctagagacc
accggatcttgccccataaagcatgagattttagaaatcggggccgtgcaagtgagcggt
ggcaaaatcattaatcgttttgaaacccttgtgaaagtcaaaagcgtgcctgattatatt
tctgatcttacaggcattgcttatgaagacaccctaaacgccccaagcgtgtatgaagcc
ttgcaagaattgcggctttttttgggtaatagcgtgtttgtggcccataacgctaatttt
gattacaattttttagggcgttattttgtagaaaaattgcattgccctttattgaattta
aagctttgcactttggatttatccaggcgcgcgattttgtccatgcgttattctttgagc
tttttaaaagagcttttagggtttggtatagaagtcagccatagagcctatgcggacgct
ttagcgagctataagctctttgaaatatgtttgttaaacttgcctaattatgtcaaaacc
acgatggatttgattgatttttccaaatgcgctaacgctctcatcaaaagacccccaaga
gccagacaccaagagatcccatcgccattccctctttttgaaaggacaaaaggtttgtta
aataccatcaaagcaaccagttaa
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