Helicobacter enhydrae: BBW65_00870
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Entry
BBW65_00870 CDS
T05984
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
het
Helicobacter enhydrae
Pathway
het03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
het00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BBW65_00870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
het03021
]
BBW65_00870
03019 Messenger RNA biogenesis [BR:
het03019
]
BBW65_00870
Transcription machinery [BR:
het03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BBW65_00870
Messenger RNA biogenesis [BR:
het03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BBW65_00870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
Spore_III_AA
OB_RNB
AAA_25
ATPase_2
AAA_22
AAA
S1CSD-TOTE-2
HHH_RecD2
Motif
Other DBs
NCBI-ProteinID:
ANV97454
UniProt:
A0A1B1U3U2
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All DBs
Position
complement(178983..180290)
Genome browser
AA seq
435 aa
AA seq
DB search
MASPKENKNSRTHTPVEGYRIEELRSKPVTELTKIAKTMGIENPQEYRRQDLIFEILKNQ
VNQGGYILFTGILELSHEGYGFLRGIDGNFADSQNDTYVSQSQIRKFALRNGDIVTGQVR
SPKDQERYYALLKIEAVNYLSIEEVKNRPLFDNLTPLFPLEQLRLEYNPMKVTGRMLDLF
SPIGKGQRALIVAPPRTGKTELMKELAHGISENHPEVKLMVLLVDERPEEVTDMERSIRG
QVFSSTFDLPSSNHIRVAELVIERAKRMVEMGEDVVILLDSITRLARAYNGATPSSGKVL
SGGVDANALHKPKRFFGAARNIEQGGSLTIIATALIETGSRMDEVIFEEFKGTGNSEIVL
ARNIADRRIYPAFDILKSGTRKDDLLLGKEKLTKVWMLRNVMQQMDDIEALSFIYAKMQK
TKDNEEFLNLMNEKE
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaccaaaagaaaacaaaaactctaggacgcatacccctgttgagggttacaga
atcgaagagctacgctccaaacctgtcacagagcttacaaaaatcgcaaaaacaatgggg
attgaaaatcctcaagagtatcgtcgtcaagatctcatttttgagattctaaaaaaccaa
gtcaatcaaggtggatatatcctttttacaggtattttggagctaagccacgagggctat
gggtttttacgcgggatcgatggaaactttgctgatagtcaaaatgacacctatgtgtca
caaagtcaaatccgcaaatttgccctaagaaatggagatattgtcacagggcaagtgcgt
tctccaaaagatcaagaacgctattatgctctactcaaaattgaggcagtcaattatctc
tccattgaagaggtgaaaaacagacctctatttgacaacctcacgccacttttcccactc
gaacaacttagacttgaatacaatcccatgaaagttacaggtagaatgcttgatcttttt
agccccattggcaaaggacaaagagcactcatagtcgcccctccacgcacaggaaaaacc
gaactgatgaaagagttggctcatggcatttctgaaaaccaccccgaagtcaaactcatg
gttttgcttgtcgatgagcgaccagaagaggtgacagatatggagagaagtatcaggggg
caggtttttagctccacttttgatttgccctcaagcaaccatatccgcgtagcagagctt
gtgatcgaaagagccaaaagaatggtggaaatgggagaagatgtcgtgattttgcttgat
tctattacacgacttgcaagagcttacaatggtgccaccccctcaagtggaaaagtgctt
agcggaggagttgatgcaaatgccctgcataaacccaaaagattttttggagcagctaga
aatattgagcaaggggggagtttgactatcattgccacagctctcattgaaactggctca
agaatggatgaggtgatttttgaagaattcaaaggcacaggaaatagcgaaatcgtgctt
gcaagaaatatcgccgatcgcagaatctaccctgcttttgatatcctcaaatcaggcaca
agaaaagatgatcttttgctaggcaaagaaaagctgacaaaggtttggatgctacgcaat
gtaatgcagcaaatggacgacatcgaggcattgagcttcatctatgccaaaatgcaaaaa
accaaagacaatgaagagtttttgaatcttatgaacgaaaaagagtga
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