Helicobacter enhydrae: BBW65_01320
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Entry
BBW65_01320 CDS
T05984
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
het
Helicobacter enhydrae
Brite
KEGG Orthology (KO) [BR:
het00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
het03016
]
BBW65_01320
Enzymes [BR:
het01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
BBW65_01320
Transfer RNA biogenesis [BR:
het03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BBW65_01320
Prokaryotic type
BBW65_01320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ANV97529
UniProt:
A0A1B1U449
LinkDB
All DBs
Position
complement(276494..277606)
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AA seq
370 aa
AA seq
DB search
MHKNFLLTHSEIDFYFSQNPRDFVVNEIPLYPASDDGEHLMLQVRKKGLSTPEMLKILSS
VLGCPQREIGYAGLKDKNALTTQYITIPARFQNILEGNLEVLQENQIKILHTAQHRNKMR
IGHLKGNAFFIRLKKVSPLNAQKIDQALGEIALWGMPNYFGYQRFGKFGDNYLEGKKLVS
KKKKYNKIEQFLVSSYQSYLFNQWLSNRILLSRLCNDFDAKEIKKASQTLNFPLSLDFQS
LIEQKQPFKIVRGDLLHHYPYGKLFALQDLSQEVERFAKQEIVPCGVLSGKKITLPQDEA
WALSERYIDEQVTESGSHRFAWVFPQNIQGEYIPQKAHFELSFELPKGSYATILLECIAQ
KEMRGQENEC
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgcacaaaaattttctcctcactcactcagagattgatttttatttttctcaaaatccg
cgtgattttgtcgtcaatgaaatccctctgtatcctgcaagtgatgatggagagcatcta
atgcttcaagtgagaaaaaagggactctccacccccgaaatgcttaaaattttatctagc
gttttgggttgcccccaaagagaaatcggatatgcagggctcaaagacaaaaatgccctc
accactcaatacatcacgattccagcaagatttcaaaacatcttggagggcaacttggaa
gttttgcaagaaaatcaaatcaaaatactccacacagcccagcatcgcaacaaaatgcgt
atcggacatctcaagggtaatgctttttttatacgactaaaaaaagtctctccgctcaat
gcacaaaaaatcgatcaagctcttggagaaattgctctgtggggtatgccaaattatttt
ggctatcagcgttttgggaaatttggggataattatctagagggcaaaaaacttgtaagc
aagaaaaaaaaatacaacaaaatagagcagtttcttgtctctagttatcaaagctatctt
tttaaccaatggctttccaatcgaattttacttagcagattgtgcaatgattttgatgca
aaagagataaaaaaagcatcgcaaactttaaacttcccattgtctttggattttcaatcc
ctaatagagcaaaaacagccatttaagattgtgcgaggcgatttgttgcaccactatccc
tatgggaaactctttgctttgcaagatttgtctcaagaagttgagcgttttgcaaaacaa
gaaattgtgccttgtggggttttgagtgggaaaaagatcacattgcctcaagatgaggcg
tgggcattgagtgagcgatacatcgatgaacaagtcacagaatcaggaagtcatcgcttc
gcgtgggttttcccccaaaatattcaaggggaatacattccacaaaaggcacattttgag
ctttcttttgaattgcccaaaggctcttatgcaactatattgcttgaatgtatagctcaa
aaagaaatgagaggacaagaaaatgagtgctga
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