Helicobacter enhydrae: BBW65_05450
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Entry
BBW65_05450 CDS
T05984
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
het
Helicobacter enhydrae
Pathway
het03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
het00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BBW65_05450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
het03021
]
BBW65_05450
03400 DNA repair and recombination proteins [BR:
het03400
]
BBW65_05450
Enzymes [BR:
het01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BBW65_05450
Transcription machinery [BR:
het03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BBW65_05450
DNA repair and recombination proteins [BR:
het03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BBW65_05450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
ANV98276
UniProt:
A0A1B1U6A7
LinkDB
All DBs
Position
1145653..1146666
Genome browser
AA seq
337 aa
AA seq
DB search
MKTIKTTPYVPTDISVEEVGTNHIRITAHPFETGYAITFAHPIRRLLMSSSLGFAPIGLQ
IEDVAHEFDSIRGIVEDVSQLVVNLKKIRFFIPNKEDSEPFKASYQFKGERILRAGDFAV
EGMEVKNPDLYIATINEGAELNLTLLIQSGIGYVPSEDIREILPQGFIPLDAFFTPVKKV
TYEIENVLVEDNPNYERIVFDIQTDGQIDPMQAFKNAILVMHSQMSVFGADLSLEAPNFS
SKNNGEDSAELKTLMIKIDTLNLSARCFNCLDRAGICHIGELVIMEESALKGIKNLGKKS
YDEITEKMAELGYPVGTKLADNTIALFEKKINKSKKD
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgattaaaactaccccttatgtccctacggatatttctgtagaggaggttgga
accaatcacatcagaatcactgcacatccatttgaaacaggatatgcgatcacttttgca
catcctatcagacgccttttgatgtctagttctttgggctttgctcccattgggcttcag
atcgaggatgtggcacatgagtttgattcgattcgtggaattgttgaagatgtttcacag
cttgttgtcaatctcaagaaaatccgcttttttattcccaacaaagaggatagtgagcct
ttcaaagcaagttatcagttcaagggagagcgtattttgcgtgctggtgattttgctgtc
gagggaatggaagtcaaaaatccagatttatacatcgccacaatcaatgaaggtgcagaa
ctcaatctcactcttttgattcagagtgggatcggatatgttccaagtgaagacattcgc
gagatattgcctcaaggttttattccacttgatgcgtttttcacgcctgtcaaaaaagta
acttatgaaattgaaaatgttttggtagaggacaatccaaactacgagcgtattgtgttt
gatattcagacagatggacagattgacccaatgcaagcttttaaaaatgcgattttggtg
atgcattctcaaatgtctgtatttggtgcagacttgtctttggaagctccaaacttctca
tcaaaaaataatggtgaagatagtgcagagctcaaaactttgatgattaagattgatact
ttgaatttgagtgcaagatgcttcaattgccttgatcgtgcaggaatttgccatattggt
gagcttgtgatcatggaagagagtgcgttgaagggtattaaaaatctaggtaaaaaatct
tatgatgagatcactgaaaaaatggcagagcttgggtatcctgtaggcacaaagcttgca
gacaatactattgcactatttgaaaagaaaatcaataaatctaaaaaggattaa
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