Helicobacter pylori Puno135: HPPN135_01275
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Entry
HPPN135_01275 CDS
T01920
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
heu
Helicobacter pylori Puno135
Pathway
heu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
heu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HPPN135_01275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
heu03019
]
HPPN135_01275
03009 Ribosome biogenesis [BR:
heu03009
]
HPPN135_01275
Enzymes [BR:
heu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HPPN135_01275
Messenger RNA biogenesis [BR:
heu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HPPN135_01275
Ribosome biogenesis [BR:
heu03009
]
Prokaryotic type
rRNA helicases
HPPN135_01275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
P-loop_SecA
Cas3-like_C_2
AAA_30
AAA_22
NAT10_TcmA_helicase
Motif
Other DBs
NCBI-ProteinID:
AEN17960
LinkDB
All DBs
Position
245137..246615
Genome browser
AA seq
492 aa
AA seq
DB search
MELNQPPLPTEIDDDAYHKPSFNDLGLKESVLKSVYEAGFTSPSPIQEKAIPAVLQGRDV
IAQAQTGTGKTAAFALPIINNLKNNHTIEALVITPTRELAMQISDEIFKLGKHARTKTVC
VYGGQSVKKQCEFIKKNPQVMIATPGRLLDHLKNERIHKFVPKVVVLDESDEMLDMGFLD
DIEEIFDYLPSEAQILLFSATMPEPIKRLADKILENPIKIHIAPSNITNTDITQRFYVIN
EHERAEAIMRLLDTQAPKKSIVFTRTKKEADELHQFLASKNYKSTALHGDMDQRDRRASI
MAFKKNDADVLVATDVASRGLDISGVSHVFNYHLPLNTESYIHRIGRTGRAGKKGMAITL
VTPLEYKELLRMQKEIDSEIELFEIPTINENQIIKTLHDAKVSEGIISLYEQLTEIFEPS
QLVLKLLSLQFETSKIGLNQQEIDAIQNPKEKTPKTPNKKTHQHEQARSFKKGQHKDRHP
KTNHHSKKPKRR
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggaattgaatcaaccaccactccctacagaaattgatgatgacgcttatcataagcct
agttttaatgatttgggcttaaaagaatcggttttaaaatccgtttatgaagccggtttc
acttccccaagccccattcaagaaaaggccattccggctgttttgcaaggccgagatgtc
atcgcgcaagcccaaacaggcacaggaaaaaccgccgctttcgctctgcccattatcaac
aaccttaaaaacaaccacaccatagaggccttagtgatcacgcccaccagagaattagcc
atgcaaattagcgatgagattttcaaattgggcaaacacgccaggactaaaaccgtgtgc
gtgtatggaggtcagagcgttaaaaaacaatgcgaatttattaagaaaaacccccaagtg
atgatcgccacgccaggaaggctattggatcatttgaaaaacgagcgcatccataaattt
gtgcctaaagtggtcgtcttagatgaaagcgatgaaatgctggatatggggtttttagac
gatattgaagagatttttgactatctccctagcgaagcgcagattttgcttttttcagcc
acgatgccagagccgattaaaagactggcggataagattttagaaaaccctattaaaatc
catatcgccccttctaatatcactaacactgacatcacccaacgcttttatgtgatcaat
gagcatgagagggctgaagcgatcatgcgccttttagacacccaagcgcccaaaaagagc
atcgttttcacgcgcactaaaaaagaagccgatgaattgcaccaattccttgcttctaag
aattacaaaagcaccgccttgcatggggatatggatcaaagggatcggcgcgcttctatc
atggcgtttaaaaaaaatgacgctgatgtgttggtggctacagatgtagcgagccgtggg
ctagacattagcggtgtaagccatgtgtttaattaccatttgcccctaaacactgaaagc
tatatccatcgcatcgggagaaccgggcgagcgggcaaaaaaggcatggcgatcacttta
gtaacccccttagaatacaaagagcttttacgcatgcaaaaagaaattgattcagagatt
gaactttttgaaatccccaccattaacgaaaatcagatcatcaaaaccttgcatgacgct
aaagtgtctgaagggatcatcagtctttatgaacagcttaccgaaatttttgagccgtct
caattggttttgaagcttttgagtttgcagtttgaaaccagcaaaattggcttaaaccag
caagaaattgatgcgattcaaaaccctaaagaaaaaacgccaaaaacccctaacaaaaaa
acgcaccagcatgagcaagcgcgttctttcaaaaagggtcagcacaaagacagacaccct
aaaacaaaccaccattctaaaaaacccaaacgccgttaa
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