Helicobacter pylori Puno135: HPPN135_01340
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Entry
HPPN135_01340 CDS
T01920
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
heu
Helicobacter pylori Puno135
Pathway
heu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
heu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HPPN135_01340 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
heu03400
]
HPPN135_01340 (xseA)
Enzymes [BR:
heu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
HPPN135_01340 (xseA)
DNA repair and recombination proteins [BR:
heu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
HPPN135_01340 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
SSB
CcmE
DUF6645
Motif
Other DBs
NCBI-ProteinID:
AEN17971
LinkDB
All DBs
Position
257614..258876
Genome browser
AA seq
420 aa
AA seq
DB search
MDVLSVSEINVQIKALLEATFLQVRVQGEVSNLTIHKVSGHAYFSLKDSQSVIRCVLFKG
NANRLKFALKEGQEVVVSGGISAYVPRGDYQINCFEIEPKDIGSLTLALEQLKEKLRLKG
YFDEANKLPKPHFPKRVAVITSQNSAAWADMKKIASKRWPMCELVCINALMQGEGCVQSV
VESIAYADSFHGTKNAFDAIVVARGGGSMEDLYSFNDEKIADALHLAKTFSMSAIGHESD
FLLSDLVADLRASTPSNAMEILLPSSDEWLQRLDGFNLKLHRSFKILLHQKKAHLEHLGA
SLKRLSFENRHHLNALKLEKLKIALENKTLEFLRFKKTLLEKISTQTLTSPFLQTKTERL
NRLENALKLAHANLKLPQFGAFVSKNNQAIELEALKRGDKIELSNEKARASAEILSVDRV
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
gtggatgtattgagcgtgagcgaaatcaatgtgcaaatcaaagcccttttggaagcgact
tttttgcaagttagggttcaaggggaagtgagtaatttgacgatccataaggtgagcggc
catgcgtatttttcgctcaaagacagccagtcagtcatcagatgcgtgctgtttaaaggg
aacgctaacaggctcaaattcgctttaaaagaagggcaggaagtggttgtttctgggggc
attagcgcgtatgttccaaggggggattatcaaatcaattgctttgaaatagagcctaaa
gatataggttcattaaccctagctttagaacaattgaaagaaaaattacgccttaagggc
tattttgatgaagccaacaaattacccaaaccgcattttcctaaacgagtggcagtcatc
acttctcaaaattcggccgcttgggcggacatgaaaaagatcgcttccaaacgatggccg
atgtgcgaattggtttgcatcaatgcgttaatgcaaggggagggctgcgttcaaagcgtg
gtggagagcatcgcttatgcggatagctttcatggcacaaaaaacgcttttgatgcgatt
gtggtggctaggggtggggggagcatggaagatttgtattctttcaatgatgagaaaatc
gctgatgcattgcatttggctaaaactttcagcatgtcagctattgggcatgagagcgat
tttttattgagcgatttagtagcggatttaagggcttctacgccttcaaacgcgatggag
attttactccctagtagcgatgaatggttgcaaagacttgatgggtttaatttgaaattg
caccgctcttttaaaattttgctccatcaaaaaaaggcgcatttagagcatttaggggct
tctttaaaacgattgagttttgaaaacagacaccatttaaacgctctaaagctagagaaa
ctaaaaatcgccctagaaaataaaaccctagaatttttacgctttaaaaaaacgcttttg
gaaaaaatctctactcaaacattaacaagcccttttttacaaactaaaacagagcgatta
aacaggctagaaaacgctcttaaactcgctcatgcaaatttgaaattaccccaatttggg
gcgtttgtgagcaaaaataaccaagcgatagaattagaggcattaaaaaggggcgataaa
attgaattgagcaatgaaaaagccagagcgagcgctgaaattttaagcgtggatagggtg
tag
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