Helicobacter pylori Puno135: HPPN135_04040
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Entry
HPPN135_04040 CDS
T01920
Symbol
uvrC
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
heu
Helicobacter pylori Puno135
Pathway
heu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
heu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HPPN135_04040 (uvrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
heu03400
]
HPPN135_04040 (uvrC)
DNA repair and recombination proteins [BR:
heu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HPPN135_04040 (uvrC)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG
UVR
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AEN18500
UniProt:
G2M9W2
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All DBs
Position
821520..823304
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AA seq
594 aa
AA seq
DB search
MADLLSSLKNLSHSSGVYQYFDKNHQLLYIGKAKNLKKRIKSYFSVRNNEITPNYRASLR
IQMMVKQIAFLETILVENEQDALILENSLIKQLKPKYNILLRDDKTYPYIYMDFSTDFPI
PLITRKILKQPGVKYFGPFTSGAKDILDSLYELLPLVQKKNCIKDKKACMFYQIERCKAP
CENKITKEEYLKIAKECLEMIENKDKLIKELELKMERLSNNLRFEEALIYRDRIAKIQKI
APFTCMDLAKLYDLDIFAFYGKGNKAVLVKMFMRGGKIISSAFEKTHSLNGFDTDEAMKQ
AIINHYQSHLPLMPEQILLNACSNETLKELQEFISRQYSKKIALSIPKKGDKLALIEIAM
KNAQEIFSQEKTSNEDLILEEARSLFKLECMPYRVEIFDVSHHANSQCVGGMVVYENHAF
QKNSYRRYHLKGSNEYTQMSELLTRRALDFAKEPPPNLWVVDGGRVQLNIALEILKSSGS
FVEVIAISKEKRDSKAYRSKGGAKDIIHTASDTFKLLPSDKRLQWVQKLRDESHRYAINF
HRSTKLKNMKQIALLKEKGIGEASVKKLLDYFGSFEAIEKASEQEKNAVLKKRI
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggctgatttattgtccagtttgaaaaacctttctcatagcagtggcgtgtatcaatat
tttgacaaaaaccaccaattactctatatcggtaaggcgaaaaatttaaaaaagcgcatc
aaaagctatttttctgtccgtaataatgaaatcacgcccaattatcgtgcaagcttacgc
atccaaatgatggtcaaacagatcgcttttttagaaaccattttagtggaaaacgagcaa
gacgctttgattttagaaaattctttaatcaagcagctcaagcctaaatacaacattctt
ttaagagacgataaaacttacccttatatttacatggatttttccactgatttccctatc
cctttaatcacacgaaaaattttaaaacagcctggcgttaaatattttggcccttttacg
agcggggctaaggatattttagacagcttgtatgaattgctcccgttagttcaaaagaaa
aattgcatcaaagataaaaaggcatgcatgttttatcaaatagagcgttgtaaagcccca
tgcgagaataaaatcaccaaagaagagtatttaaaaatcgctaaagaatgtttagaaatg
attgaaaataaagacaaactcatcaaagagcttgaattaaaaatggagcgcctttctaat
aacttgcgttttgaagaagccctcatttatagggataggattgcaaaaatccaaaaaatc
gcccctttcacttgcatggatttagccaaactctatgatttggatatttttgctttttat
ggcaaaggtaataaggcggtattggtgaaaatgtttatgcgtgggggtaaaatcatttct
tcagcgtttgaaaaaacccactctctcaatgggtttgacactgatgaagcgatgaaacaa
gccattatcaaccattaccaatcgcatttgcctttaatgccagaacaaatcttattgaac
gcttgctctaatgaaacgcttaaagaattgcaagaatttatctctcgccaatactctaaa
aaaatcgctcttagcattcctaaaaaaggcgataagctcgctttaatagaaatcgctatg
aaaaacgctcaagagatttttagccaggaaaaaacctctaatgaagatctgattttagaa
gaagcgcgatcgctctttaaattagagtgcatgccttatagggtggaaatctttgatgta
agccaccatgccaacagccaatgcgtggggggaatggtcgtgtatgaaaaccatgcattt
caaaaaaactcctatcggcgctaccatttaaaaggctctaatgaatacactcaaatgagc
gaattgctcaccagaagggctttagattttgccaaagagccgccgcctaatttatgggtg
gtagatggagggagggtgcaattaaacatcgctttagaaattttaaaaagcagcgggagt
tttgtagaagtgatcgctatttctaaagaaaaaagggattctaaagcttatcgctctaaa
gggggtgctaaagacattatccacaccgctagcgatacttttaaattgctccctagcgac
aaacgcttgcagtgggtgcaaaaattgcgcgatgaaagccaccggtatgcgataaacttc
catagatccactaaacttaaaaacatgaaacaaatcgctcttttaaaagaaaagggcata
ggagaagccagcgtgaaaaaattgttggattattttgggagttttgaagcgatagaaaaa
gcgagtgagcaagaaaaaaacgccgttttaaaaaaacgaatttaa
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