Helicobacter pylori Puno135: HPPN135_04500
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Entry
HPPN135_04500 CDS
T01920
Name
(GenBank) rep helicase, single-stranded DNA-dependent ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
heu
Helicobacter pylori Puno135
Pathway
heu03420
Nucleotide excision repair
heu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
heu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HPPN135_04500
03430 Mismatch repair
HPPN135_04500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
heu03400
]
HPPN135_04500
Enzymes [BR:
heu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HPPN135_04500
DNA repair and recombination proteins [BR:
heu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HPPN135_04500
MMR (mismatch excision repair)
Other MMR factors
HPPN135_04500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
AAA_11
Viral_helicase1
AAA_30
DEAD
Motif
Other DBs
NCBI-ProteinID:
AEN18590
LinkDB
All DBs
Position
912912..914942
Genome browser
AA seq
676 aa
AA seq
DB search
MLETLQLNPEQLKAAKALKGYNLVIASAGTGKTSTIVGRILYLLDNGIKPEEILLLTFTN
KASNEMIARVAKYSKLSSKIEAGTFHAVAYRYLKEHYPNLSLKQPKELKKLLESIVDTKN
ALTDDDKKPYTSQHLYALYSLYTNALKQEDFSAWLSHKNPEHTPYAAFYENILDEFENTK
KKHNYIDYNDLLLLFKQAMLERPSPYKEVLCDEFQDTNPLQESILDAINPPSLFCVGDYD
QSIYAFNGADISIISNFTQKYKNAQVFTLTKNYRSSKEILDLANQVIQHNERIYPKNLEV
VKSGHFNKPGLLNYNDNIAQCQDIAKRIVMRKNFKEVAVIFRNNASADQLEAALRSHNVP
SKRKGSASFFESKEVALALDICALIFNPKDIMAAIHVLSHISDIGSNTAKDIHEALMLLG
NGDLKLALTHPNKEAKIYTKKKEITSMGLFEEIFALENSSRFNSVINKAFHSHPVLMHPK
ISLNGAKMLSDFFILYTKAPTHSPSALIKHILESVFFQTFKTRLLKERSKNKDGSYNEFK
KLQAQKRFNEKMDLLSSLAKNYQNLGRFLNGTLIGSSEATQGEGVNLLSVHASKGLEFKD
VYIIDLMEGRFPNHKLMNTGGGIEEERRLFYVAITRAKENLWLSYAKNELRENAKPKEHK
PSVFLYEAGLLKPDLK
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
ttgttagaaactttgcaattaaaccctgagcaactaaaagcggccaaggctttgaaaggg
tataatttagtgattgcgagcgctggcacaggaaagacttctacgattgtggggcgcatt
ttatacctgcttgataacggcatcaagcctgaagaaatcttgcttttgactttcaccaat
aaagcgagtaatgaaatgattgccagggtggctaaatattccaagttaagctccaaaatt
gaagcgggcactttccatgcggtggcgtatcgctatttgaaagagcattaccccaattta
agcctaaagcaacctaaagaattgaaaaaacttttagaaagcattgtggatactaaaaat
gcgctaacagatgacgataaaaagccctacacttcgcaacacctctacgccctctattct
ctttataccaacgctctaaaacaagaagattttagcgcatggctttctcataaaaaccct
gaacacacgccatacgccgccttttatgaaaacattttagacgaatttgaaaacaccaaa
aaaaagcataattatattgactataacgacttactgctgttatttaaacaagcgatgcta
gaaagacctagcccttataaagaagtgctttgcgatgagtttcaagacactaacccctta
caagaatccattttagacgctatcaaccctcccagtttgttttgcgtgggcgattacgat
cagagcatttacgcttttaatggggcggatatttctatcatttctaatttcactcaaaaa
tacaaaaacgcccaggttttcacgctcactaaaaactaccgctcttctaaagagatttta
gatctcgctaatcaagtgatacaacacaacgagcgcatttaccctaaaaatttagaagtg
gtgaaatcagggcatttcaataagcctgggcttttaaattacaacgacaatatcgcgcaa
tgccaagacatcgctaaacgcattgtcatgcgaaagaattttaaagaagtggcagtgatt
tttaggaataacgcgagcgcggatcaattagaagccgctttaagatcccataatgtgcca
agcaaaagaaaagggagcgcaagcttctttgaatccaaagaagtggcgttagcgttagac
atttgcgcgctcatctttaaccctaaagacattatggcagcaatccatgttttaagccat
atcagcgatattggctctaacaccgctaaagacattcatgaggccttaatgcttttaggc
aatggcgatctcaaactagccctaacccaccctaataaagaagccaaaatctacaccaag
aaaaaagaaatcacctctatggggctttttgaagaaatttttgccttagaaaacagctca
aggtttaatagcgtgataaataaagcgttccattcgcacccggtgttgatgcaccctaaa
atctcgctcaatggggctaaaatgcttagcgattttttcattctttataccaaagcccct
acccattcccctagcgctttaatcaaacacatcctagaaagcgtgttttttcaaaccttt
aaaacacgccttttaaaagagcgctccaaaaataaggacggctcttataacgaatttaaa
aaactccaagcgcaaaaacgcttcaatgaaaaaatggacttgctgagttctttggcgaaa
aattaccagaatttagggcgttttttaaacggcactttaataggctctagtgaagccacg
caaggcgagggcgtgaatttattgagcgtgcatgcttctaaaggcttggaatttaaagat
gtttatattatagatttaatggagggccgtttccctaaccacaagctcatgaataccggt
gggggcattgaagaagagcggcggcttttttatgtcgctatcacaagggctaaggaaaat
ttatggctttcttatgcgaaaaacgaattgagagaaaacgccaaacctaaagagcataaa
ccctcggtgtttttgtatgaagcggggcttttaaaacccgatttaaaataa
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