Helicobacter pylori Puno135: HPPN135_04575
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Entry
HPPN135_04575 CDS
T01920
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
heu
Helicobacter pylori Puno135
Brite
KEGG Orthology (KO) [BR:
heu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
heu03016
]
HPPN135_04575 (truD)
Enzymes [BR:
heu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
HPPN135_04575 (truD)
Transfer RNA biogenesis [BR:
heu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HPPN135_04575 (truD)
Prokaryotic type
HPPN135_04575 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
GutM
Motif
Other DBs
NCBI-ProteinID:
AEN18605
LinkDB
All DBs
Position
938716..939861
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AA seq
381 aa
AA seq
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MNLNFMPLLHAYNHASIDFHFNSSARDFCVHEVPLYEFSNTGEHAVIQVRKSGLSTLEML
QIFSQILGVRIAELGYAGLKDKNALTTQFISLPKKYAPLLEKNTSNFQERNLKILSLNYH
HNKIKLGHLKGNRFFMRFKKMTPLNAQKTEQVLEQIAQFGMPNYFGAQRFGKFNDNHQEG
LKILQNQTKFAHQKLNAFLISSYQSYLFNTLLSKRLEISKIISAFSVKENLEFFKQKNLN
INPNTLKALKNQAHPFKILEGDVMCHYPYGKFFDALELEKESERFLKKEAVPTGLLDGKK
ALYAKNLSLEVEKEFQHNLLSSHAKTLGSRRFFWVFAENVTSQYVKEKAQFELGFYLPKG
SYASALLKEIKHEKEENNDEF
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaaattttatgcccctattgcatgcttataaccatgcgagcattgattttcat
ttcaattctagcgctagggatttttgcgtgcatgaagtgcctttgtatgaattcagcaac
acaggcgaacatgccgttattcaagtgagaaaaagcggtttaagcactttagaaatgctt
caaattttttctcaaattttaggggtaagaatcgctgaattgggttatgcaggcttgaaa
gataaaaacgcgctgacgactcaattcatctcactccctaaaaaatacgcccctttatta
gaaaaaaatacgagcaactttcaagaaagaaaccttaaaatcctgtctttgaattaccac
cataataaaatcaaattagggcatttgaaagggaatcgcttttttatgcgttttaaaaaa
atgacccccctaaacgctcaaaagactgaacaggttttagaacaaatcgcgcagtttggc
atgcctaattattttggagcgcaacgctttgggaaattcaatgacaaccaccaagagggt
ttaaaaatcttgcaaaatcaaacgaaattcgcccatcaaaaattaaacgcttttttaatt
tcaagctatcaaagttatttgtttaatacgcttttaagcaaacgattagaaatcagtaaa
atcattagcgcttttagtgtcaaagaaaatttagaatttttcaaacaaaaaaatttaaat
atcaatccaaataccctaaaagcccttaaaaaccaagcccaccccttcaaaatcttagaa
ggcgatgtgatgtgccattacccttatgggaagttttttgacgctttagaattagaaaaa
gagagcgaaaggtttttgaaaaaagaagctgtgcctacggggttactagatggcaaaaaa
gctctttatgcaaaaaatttgagtttagaagttgaaaaagaattccagcataacctttta
agtagccatgctaaaacgctaggatccaggcggtttttttgggtgtttgcagaaaatgta
acttctcaatatgtgaaagaaaaggcgcaatttgaattgggattttacttgcctaaaggg
agttatgcgagcgcgttgctcaaagaaatcaagcatgagaaagaagaaaataatgacgaa
ttttga
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