Helicobacter pylori Puno135: HPPN135_05060
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Entry
HPPN135_05060 CDS
T01920
Name
(GenBank) topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
heu
Helicobacter pylori Puno135
Brite
KEGG Orthology (KO) [BR:
heu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
heu03032
]
HPPN135_05060
03400 DNA repair and recombination proteins [BR:
heu03400
]
HPPN135_05060
Enzymes [BR:
heu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HPPN135_05060
DNA replication proteins [BR:
heu03032
]
Prokaryotic type
DNA Topoisomerases
HPPN135_05060
DNA repair and recombination proteins [BR:
heu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HPPN135_05060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
DUF4364
Motif
Other DBs
NCBI-ProteinID:
AEN18689
LinkDB
All DBs
Position
complement(1035464..1037524)
Genome browser
AA seq
686 aa
AA seq
DB search
MKDSVIIIESPNKVAKIKEITGASVFATIGHFMQLKSYDENNNFKPTFEYDPQKKKRIFE
IIEACKNKKVYIATDPDREGYAIGYHFYEKIRRIASSIYRAEFFEITPSGINKGLQNASL
FENTNKQMYQSALARRVADMLLGFTLSPYLGKALGQMKGSSAGRVQTPCLKLIVDRDREI
EKFKALPENEKVSYQIQAKINDNANKEVIIKHCDENGEEIKFNDKEEALKLFESLKDNKA
CLLKDLKNSVAETKPKKPFITSTLLEKASSELGLGISEVQSLAQSLFEAGLVTYIRTDAE
SLSVEFLNEAESFYTPIYKEVYLKREYKAGKQSQAEAHEAIRIAHPHTYENLESVVYNAG
ITNQDALKLYQLIFERTIESQGKNAIYDKQDLLFKIKNEYFKCSVKSLKSAGFLAMFSKK
ELDGDESNDDKDDKEKDQNAQFNLKIDDMLNLDDLVLATIKRNAPSPYKEAGFVKLLENK
GIGRPSTYATYLPTLLKREYISISQDKKHTITPTHKGKRVVEVFENAYQFIIDLTYTKQM
EEVLDEIVENKSSYVDFISNLSSKCPKIEKLERNDDEIKPSSEGQITYIENILRDLQLEL
SEEFKNYKEDNRVAKAFLDRYIKEHEFFKKNNKKASSSNNDEIRPATPKQISFAESLAKK
HHVKLPKDYKSNMKVCGDFINEYSKK
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatagcgtcatcattattgaaagccctaataaagtggctaagattaaagaaatc
acaggagctagtgtttttgctaccataggacattttatgcaactaaaaagctatgatgaa
aataataactttaagccgacttttgaatacgacccccaaaagaaaaagcgtatttttgag
ataatagaggcgtgtaaaaacaaaaaagtttatattgccactgaccctgatagagagggt
tatgctataggctatcatttttatgaaaaaattagaaggatagcaagttctatttataga
gcagagttttttgaaatcactccaagtgggattaacaagggcttacaaaacgcttcttta
tttgaaaacactaataagcaaatgtatcaaagcgctttagcaaggcgtgtggctgatatg
ctcttaggttttacgctctccccttatttaggcaaagctttagggcaaatgaaaggctct
agtgctggaagagtgcaaaccccttgtttaaagcttattgtggatagagacagagaaatt
gaaaaatttaaggctttacctgaaaatgagaaagtaagctatcaaatccaagccaagatt
aacgacaatgctaataaagaagtcattatcaagcattgtgatgaaaatggcgaagaaatt
aaattcaatgacaaagaagaggctttaaaactctttgaaagtttgaaagacaataaagct
tgtcttttaaaggatttaaaaaattctgttgcagagactaaacctaaaaagccctttatc
acttctacgcttttagagaaagcgagttctgagttaggtttaggtattagcgaagtgcaa
tctttagctcaaagtctttttgaagctgggcttgttacttacattagaacggacgctgaa
agtttgagtgtggagtttttaaatgaggcagagagcttttatacacccatttataaagaa
gtgtatctaaaaagagaatataaagctggtaagcaaagccaagcagaagctcacgaggcg
attaggattgcgcaccctcatacttatgaaaacttagaaagtgtggtctataatgctggc
attactaatcaagacgctttaaaactctatcaacttatttttgaaagaactattgaaagt
caaggcaagaatgctatttatgacaaacaagacttgctctttaaaatcaaaaatgagtat
tttaagtgtagcgttaagagtttaaaaagcgctgggtttttagcaatgttttctaaaaaa
gaattagatggcgatgaaagtaatgatgacaaagatgataaagaaaaagaccaaaacgca
caatttaatctaaaaattgatgatatgttaaacctagatgacttagttttagctaccatt
aaaagaaatgccccaagcccttataaagaggcaggctttgtaaagctcttagaaaataaa
ggcataggcagacctagcacttatgctacctacttacctacgcttttaaaaagagaatac
atcagcattagccaagataagaaacacaccattacgcccacgcataaaggcaaaagagta
gtagaagtgtttgaaaatgcttatcaatttattattgatttgacctacaccaagcaaatg
gaagaagtgctagatgagattgtagaaaataaaagctcttatgtagattttataagtaat
ttaagttctaaatgccctaagattgaaaagctagaaagaaatgatgatgagataaagcct
agtagtgaggggcaaatcacttatatagaaaatattttaagagatttacaattagaacta
agcgaagagtttaaaaactacaaagaagacaacagggtagctaaagcgtttttggataga
tatattaaagagcatgagttcttcaagaaaaacaataaaaaggctagtagctctaataat
gatgaaattagacctgctacacccaaacaaattagctttgctgaaagcttggctaaaaag
catcatgtcaagctccctaaagattacaaaagcaacatgaaagtgtgtggggattttatc
aatgagtatagtaagaagtag
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