Helicobacter pylori Puno135: HPPN135_07820
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Entry
HPPN135_07820 CDS
T01920
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
heu
Helicobacter pylori Puno135
Pathway
heu03030
DNA replication
heu03430
Mismatch repair
heu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
heu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HPPN135_07820
03430 Mismatch repair
HPPN135_07820
03440 Homologous recombination
HPPN135_07820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
heu03032
]
HPPN135_07820
03400 DNA repair and recombination proteins [BR:
heu03400
]
HPPN135_07820
Enzymes [BR:
heu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HPPN135_07820
DNA replication proteins [BR:
heu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HPPN135_07820
DNA repair and recombination proteins [BR:
heu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HPPN135_07820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AEN19223
LinkDB
All DBs
Position
complement(1588845..1589708)
Genome browser
AA seq
287 aa
AA seq
DB search
MSDSLLHKDIQALIARLKHQDLSLGMLEKSLSRLIYDEINLEYLKACGLNFVETSENLIT
LKNLKTPLKDEVFSFIDLETTGSCPLKHEILEIGAVQVKGGEIINRFETLVKVKSVPDYI
AELTGIAYEDTLNAPSVHEALQELRLFLGNSVFVAHNANFDYNFLGRYFVEKLHCPLLNL
KLCTLDLSKRAILSMRYSLSFLKELLGFGIEVSHRAYADALASYKLFEICLLNLPSYIKT
TMDLIDFSKCANTLIKRPPRARHQETPPPFSLFERTKGLLNIIKATS
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacagcctcttgcataaagatattcaagccctaatcgctcgcttaaagcaccag
gatttaagcttaggcatgctagaaaaatcgctctctcgccttatttatgatgaaatcaat
ttggaatatttaaaagcatgcgggcttaatttcgtagaaacgagcgaaaatttaatcacg
ctcaaaaaccttaaaaccccccttaaagatgaggttttctcctttattgatttagaaacc
accggctcttgccccctaaaacatgagattttagaaatcggagccgtgcaagtaaagggg
ggggaaatcatcaatcgttttgaaacccttgtgaaagtcaaaagcgtgcctgattatatc
gctgagcttacaggcatcgcttatgaagacaccctaaacgccccaagcgtgcatgaagcc
ttgcaagaattgcggctttttttaggcaatagcgtgtttgtagcccataacgctaatttt
gattacaactttttagggcgttattttgtagaaaaattgcattgccccttattgaattta
aagctttgcactttggatttatccaaacgagccattttgtccatgcgttattctttgagc
tttttaaaagagcttttagggtttggtatagaagtcagccacagagcctatgcggacgct
ttagcgagctataagctctttgaaatatgtttattaaacttgcccagttacatcaaaacg
acgatggacttgattgatttttccaaatgcgctaacaccttgatcaaaagacccccaaga
gccagacaccaagagactccaccgccattttctctttttgagaggacaaagggtttgtta
aatatcataaaagcaaccagttaa
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