KEGG   Herbaspirillum sp. DW155: HBDW_01060
Entry
HBDW_01060        CDS       T10195                                 
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
hew  Herbaspirillum sp. DW155
Pathway
hew03020  RNA polymerase
Brite
Enzymes [BR:hew01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     HBDW_01060 (rpoC)
Transcription machinery [BR:hew03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     HBDW_01060 (rpoC)
DNA repair and recombination proteins [BR:hew03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      HBDW_01060 (rpoC)
SSDB
Other DBs
NCBI-ProteinID: BEV13318
LinkDB
Position
117830..122071
AA seq 1413 aa
MKALLDLFKQVQQNEQFDAIKIGLASPDKIRSWSFGEVKKPETINYRTFKPERDGLFCAK
IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTLAKVRRERMGHIELASPTAHIWFLKSL
PSRLGMVLDMTLRDIERVLYFEAYVVTDPGMTPLKKCQIMSEDDYAAKYEEYGDDFIAFM
GAEGIRELLRSIDIDREAETLRQELKDSKSEAKIKKYAKRLKVLEAFQRSGIKPEWMIME
VLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPEIITRNEKRMLQ
EAVDSLLDNGRRGKAMTGANKRPLKSLAEMIKGKGGRFRQNLLGKRVDYSGRSVIVVGPQ
LKLHQCGLPKLMALELFKPFIFNKLELMGLSTTIKAAKKLVEAQEPVVWDILEEVIREHP
VMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSIEAQMEA
RTLMLASNNILFPSNGEPSIVPSQDIVLGLYYATREAINGKNEGMMFQDVSEVIRAYDNK
EVELATRITVRIVEHPKDPVTGEFVRTVKRYETTVGRAILSEILPKGLPFSVLNRALKKK
EISKLINTSFRKCGLRATVVFADQLMQSGFRLATRAGISICVDDMLVPPQKATLIAAAES
EVKQIEQQYSSGLVTAGERYNKVVDIWGKAGDEVGKAMMDQLKVEEVITREGKKTTQESF
NAIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGA
RKGLADTALKTANSGYLTRRLVDVTQDLVVIEDDCGTSNGSAMKALVEGGEVIEALRDRI
LGRVAATDIVNPEDQSTLFEAGTLLDEDKVEEIERMGIDEVKVRTPLTCDTRYGLCAKCY
GRDLGRGLLVNSGEAVGVVAAQSIGEPGTQLTMRTFHIGGAASRAAVASSVEAKSNGTVR
FTATMRYVTNGKGEQIVISRSGEVLITDDLGRERERHKVPYGATLIVKDGLTIKAGTALA
TWDPLTRPIITEYSGTVKFENVEEGSTVAKQIDEVTGLSTLVVIDAKRRGPSSKVMRPQV
KLLNEQGEEVKIAGTEHSVTIGFQVGALITVKDGQQVHVGEVLARIPTESQKTRDITGGL
PRVAELFEARSPKDAGMLAEVTGTVAFGKETKGKQRLEITDMEGTKHEFLITKDKQVLVH
DGQVVNKGEMIVDGPADPQDILRLLGIEALARYIVDEVQDVYRLQGVKINDKHIEVIVRQ
MLRRVQVVEPGDTNYITGEQVERSELLDENDRVVAEGKIPATYENVLLGITKASLSTDSF
ISAASFQETTRVLTEAAIMGKKDGLRGLKENVIVGRLIPAGTGLAFHRARKEKDAWEAEE
RAALLEAERASRSDFADEEISSTESIGGGEGEA
NT seq 4242 nt   +upstreamnt  +downstreamnt
atgaaagcactgctcgatctattcaagcaagtccagcaaaacgaacaattcgacgcgatc
aagatcggtctggcttcgcctgacaagatccgctcgtggtccttcggcgaagtcaagaag
ccggaaaccatcaactaccgtaccttcaagcccgagcgcgacggcctgttctgcgccaag
atcttcggccccatcaaggactacgagtgcctgtgcggcaagtacaagcgcctgaagcac
cgcggcgtgatctgcgagaagtgcggcgtggaagtgaccctggccaaggtgcgccgcgag
cgcatgggccacatcgagctggcttccccgactgcccacatctggttcctgaagtcgctg
ccgtcccgtctgggcatggtgctggacatgaccctgcgcgacatcgagcgcgtgctgtac
ttcgaagcctacgtcgtgaccgatcccggcatgaccccgctgaagaagtgccagatcatg
tccgaagatgactacgccgccaagtacgaagagtacggcgacgacttcatcgccttcatg
ggcgccgaaggtatccgcgaactgctgcgctcgatcgatatcgaccgcgaagcggaaacc
ctgcgccaggaactgaaggactccaagtccgaagccaaaattaagaagtacgccaagcgc
ctgaaggtgctggaggcgttccagcgctcgggcatcaagcccgagtggatgatcatggaa
gtgctgcccgtgctgccgccggaactgcgtccgctggtgccgctggatggcggccgcttc
gcgacctccgacctgaacgacctgtatcgccgcgtcatcaaccgcaacaaccgcctgaag
cgcctgatggaactgcgcgcgcctgaaatcatcacgcgcaacgaaaagcgcatgctgcag
gaagcggtggactcgctgctggacaacggtcgtcgcggcaaggccatgaccggcgccaac
aagcgtccgctgaagtcgctggccgaaatgatcaagggcaagggcggtcgtttccgtcag
aacctgctgggcaagcgcgtggactattcgggccgttcggtcatcgtggtgggtccgcag
ctgaagctgcaccagtgcggtctgcccaagctgatggccctggaactgttcaagcccttc
atcttcaacaagctggaactgatgggtctgtcgaccaccatcaaggccgccaagaagctg
gtggaagcgcaagagccggtggtctgggacatcctggaagaagtcatccgcgaacacccg
gtcatgctgaaccgcgcgccgaccctgcaccgtctgggcatccaggcgttcgagccggtc
ctgatcgaaggcaaggcgatccagctgcacccgctggtctgcgcggcgttcaacgccgac
ttcgacggcgaccagatggccgtccacgtgccgctgtcgatcgaagcgcagatggaagcc
cgcaccctgatgctggcctccaacaacatcctgttcccgtccaacggcgaaccgtcgatc
gtgccgtcccaggatatcgtgctgggtctgtactatgccacccgtgaagccatcaacggc
aagaacgaaggcatgatgttccaggatgtgtccgaagtcatccgcgcctacgacaacaag
gaagtcgagctggccacccgtatcacggtgcgtatcgtcgagcatccgaaggacccggtc
accggcgaattcgtgcgtaccgtcaagcgttacgagaccaccgtcggccgcgcgatcctc
tccgagatcctgcccaagggcctgccgttctcggtgctgaaccgcgcgctgaagaagaag
gaaatctcgaagctcatcaacacgtccttccgcaagtgtggtctgcgtgccaccgtcgtg
tttgccgaccagctgatgcagtcgggcttccgcctggcgacccgcgccggtatctccatc
tgcgtggacgacatgctggtgccgccgcaaaaggccaccctgatcgccgctgccgagtcc
gaagtcaagcagatcgaacagcagtactcctccggtctggtgaccgcaggcgagcgctac
aacaaggtcgtggacatctggggcaaggccggcgacgaagtcggcaaggccatgatggac
cagctgaaggtggaagaggtcatcacccgcgaaggcaagaagaccactcaggaatcgttc
aacgcgatttacatgatggccgactccggcgcccgtggttcggctgcccagatccgccag
ctggccggtatgcgcggcctgatggccaagcctgacggctccatcatcgaaacgccgatt
accgcgaacttccgcgaaggcctgaacgtgttgcagtacttcatctcgacgcacggcgcc
cgtaagggtctggccgataccgcgctgaagaccgcgaactccggttacctgacccgtcgt
ctggtggacgtcacccaggatctggtcgtgatcgaagacgattgcggcacctccaacggt
tcggccatgaaggcgctggtcgaaggcggtgaagtcatcgaagccctgcgcgaccgtatc
ctcggccgtgtggctgcgaccgatatcgtcaatccggaagatcaatccaccctgttcgaa
gccggcaccctgctggacgaagacaaggtggaagagatcgaacgcatgggtatcgacgaa
gtgaaggttcgtactccgctgacctgcgacacccgctacggcctgtgcgccaagtgctat
ggccgcgacctgggccgtggcctgttggtgaactccggcgaagccgtcggtgtggtggct
gcgcagtccatcggtgagccgggtacccagctgaccatgcgtaccttccacatcggcggt
gcggcatcgcgtgcagcggtggcctcctcggtggaagccaagtccaacggcaccgtgcgc
ttcaccgccacgatgcgttatgtgaccaatggcaagggcgaacagatcgtcatttcccgt
tccggcgaagtgctgatcaccgacgacctgggccgtgagcgtgagcgtcacaaagtgccg
tacggcgccaccctgatcgtcaaggatggcctgaccatcaaggccggtaccgcactggcc
acctgggatccgctgacccgtccgatcatcaccgagtactccggtaccgtgaagttcgaa
aacgtggaagaaggctccaccgtggccaagcagatcgatgaagtcaccggtctgtcgacc
ctggtggtcatcgatgcgaagcgtcgtggtccttcctcgaaggtcatgcgtccgcaggtg
aaattgctcaacgaacaaggcgaagaagtgaagatcgccggcaccgaacactcggtgacc
atcggcttccaggtcggcgcgctgatcaccgtgaaggacggccagcaggtgcatgtgggt
gaagtgctggcccgtatcccgaccgaatcgcagaagacccgtgacattaccggtggtctg
ccgcgcgtggccgagctgttcgaagcccgttcgccgaaggatgccggcatgctcgccgaa
gtcactggtaccgttgccttcggcaaggaaaccaagggcaagcagcgtctggaaatcacc
gacatggaaggcaccaagcacgagttcctgatcaccaaggacaagcaggtgctggtgcac
gacggccaggtggtgaacaagggcgaaatgatcgtggacggcccggccgatccgcaagat
atcctgcgcctgttgggtatcgaagcgctggcccgctacatcgtcgacgaagtgcaggac
gtgtaccgtctgcagggcgtgaagatcaacgacaagcacatcgaagtgatcgtgcgccag
atgctgcgccgcgtgcaagtggtggagccgggcgacaccaactacatcaccggtgagcag
gtcgagcgctccgaactgctggacgagaacgaccgcgtggtggccgaaggcaagattccg
gcgacctacgaaaacgtgctgctgggtattaccaaggcatcgctgtcgaccgactccttc
atctcggccgcatcgttccaggaaaccacccgcgtgctgaccgaagcggccatcatgggc
aagaaggacggcctgcgcggcctgaaggaaaacgtcatcgtcggccgcctgatcccggcc
ggtactggcctggccttccaccgcgcccgcaaggaaaaggatgcatgggaagccgaagag
cgcgcagcactgctcgaagccgaacgtgcctcccgttccgacttcgccgacgaggaaatc
tcctcgaccgaatccatcggtggcggcgaaggcgaagcgtaa

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