Herbaspirillum sp. DW155: HBDW_01680
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Entry
HBDW_01680 CDS
T10195
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
hew Herbaspirillum sp. DW155
Brite
KEGG Orthology (KO) [BR:
hew00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hew02000
]
HBDW_01680
Transporters [BR:
hew02000
]
Other transporters
Pores ion channels [TC:
1
]
HBDW_01680
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
BEV13380
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Position
170028..172091
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AA seq
687 aa
AA seq
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MALQRQHIASAVLTALAAWSVSASAQTADATAASSAAPAAPAASASQPALQPIVVTATPF
ASDENVQVLAPAKVIAGDELRNKLGNSLGDTLSGELGVSASAFGAGASRPIIRGMEGPRV
MILQNGMGVSDVSTVSNDHAVATEAATARQIEILRGPAALLYGSGAIGGLVNVVNDRIPT
ELVGKPTGTVEARYGTVDGEKNTSFSVDTSAGQIGLHLDGNYRDTDNTKIPGNARQGDSS
SASGRLPNSFTHETSLGGGLSYVADWGYVGLSVATLDDHYGIPTDEMSFIDLHQNRYDLD
TVVNKPFAGIEKFRFRMGYTDYTHIEKAQDGTPNTVFSNRALQTRWELMHAPLAGWHGTF
GVQTEQSNYSALTPNTGASELTPPTRSSSFAGFLVEERQFGQVLASAGLRAESVSRRPDS
GSGLPGRDFSLISWSGGGLWTFQPGYGLGLTYSFAQRAPTVEELYSNGPHESTSTYDIGD
NQLKKETSHNIELSLQKTEGLVRWKGNVFRNKVNNYIYGRTNGQVNDSGVADPNGEFTQR
FWSQGDATIRGVEAEVTYNWNGEGVSGRLFADTSRGTLDNLGNLPLQPATRYGVELGYKT
GPWASGVKVLRAQKQDRLASFETYATPSYTQLDANLSYTQRLNGVKLTWFALARNLLNQD
IRLSTSVLRETVPLGGRNFIVGVRTAF
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggctcttcaacgccaacatatcgcctcggccgtcctcacggccctggcggcctggtcc
gtgtcggcttcggcccagactgcggatgccaccgctgcatcttctgccgcgcccgccgcc
cccgccgcctccgcctcgcaaccggccctgcaacccatcgtcgtcaccgccactcccttc
gcctcggacgaaaacgtgcaagtgctggcccccgccaaggtcattgccggcgacgaattg
cgcaacaagctcggcaactcgctgggcgacacgctctcgggcgagctgggcgtatcggcc
tcggccttcggcgccggcgcctcgcgtcccatcatccgcggcatggaaggcccgcgcgtg
atgatcctgcaaaacggcatgggcgtctccgacgtctccaccgtctccaacgaccatgcc
gtagccaccgaagcggctaccgcccgccagatcgaaatcctgcgcggtccggccgcgctg
ctgtatggttcgggtgccatcggcggcctggtcaacgtggtcaacgaccgcatccccacc
gaactggtcggcaagcccaccggcaccgtcgaagcccgctatggcaccgtcgatggcgag
aagaacacttccttctcggtcgatacctcggccggccagatcggcctgcacctcgatggc
aactaccgcgataccgacaacaccaagatccccggcaacgcccgccagggcgacagcagc
agcgcctccggccgcctgcccaattctttcacccatgagaccagcctgggcgggggtctg
tcctacgtcgccgactggggttacgtcggcttgtcggtggcgaccctggatgatcattac
ggcatcccgaccgatgaaatgtccttcatcgatctgcaccagaaccgctacgacctcgat
accgtcgtcaacaagcccttcgccggcatcgagaagttccgcttccgcatgggctatacc
gactacacccacatcgagaaggcgcaggatggcacgcccaacacggtcttctccaaccgt
gccctgcagacccgctgggaattgatgcacgcgccgctggccggctggcacggcaccttc
ggcgtacagaccgagcagagcaactactcggccctcacgcccaacaccggcgcctccgaa
ctgaccccgccgacgcgctcgtcttcctttgcgggcttcctggtggaagagcgccagttc
ggccaggtgctggccagcgccggcctgcgcgccgagagcgtgagccgccgtcccgacagc
ggcagcggcctgccgggacgcgacttcagcctgatctcctggtctggcggtggcctgtgg
accttccagcccggttacggcctgggcctgacctactccttcgcccagcgcgcgccgacg
gtggaggagttgtactccaacggtccgcatgaatcgacctcgacctacgacatcggcgac
aaccagttgaagaaggaaacttcacacaacatcgaactgagcctgcagaagaccgaagga
ctggtgcgctggaagggcaacgtgttccgcaacaaggtcaacaactacatctacggccgt
accaacggccaggtgaacgactccggtgtggccgatcccaatggcgaattcacccagcgc
ttctggtcgcagggcgatgccaccatccgcggcgtggaagccgaggtgacctacaactgg
aacggtgaaggcgtctccggccggctctttgccgacacctcgcgcggcacactcgacaat
ctcggcaacctgcccctgcagccggccacccgctacggcgtcgaactgggctacaagacc
ggcccctgggccagcggcgtgaaggtcttgcgcgcgcagaagcaggatcgcctggcctcc
ttcgaaacctacgcaactccgtcctatacccagctcgatgccaacctgtcctacacccag
cgcctcaacggcgtgaagctgacctggttcgcgctggcgcgcaacctgctgaaccaggac
atccgcttgtccacttcggtgctgcgcgagacggtgccgctgggtggccgcaacttcatc
gtgggggtacgcaccgccttttga
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