Herbaspirillum sp. DW155: HBDW_01940
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Entry
HBDW_01940 CDS
T10195
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
hew Herbaspirillum sp. DW155
Pathway
hew00300
Lysine biosynthesis
hew00470
D-Amino acid metabolism
hew01100
Metabolic pathways
hew01110
Biosynthesis of secondary metabolites
hew01120
Microbial metabolism in diverse environments
hew01230
Biosynthesis of amino acids
Module
hew_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
hew00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HBDW_01940 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HBDW_01940 (lysA)
Enzymes [BR:
hew01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
HBDW_01940 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
BEV13406
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Position
201556..202848
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AA seq
430 aa
AA seq
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MSHFSYRNGALHAEDVSLQALAEQFGTPLYVYSKAALVQNFSAYADACRAAGRVEGGKGG
ALVCYSVKSNSNLAVLNLLGKLGSGFDIVSGGELLRVVAAGGDARKVIFSGVGKGRDEMK
LALEHDILCFNVESIPEVARLNEVAGALGKRARISLRVNPNVDAKTHPYISTGLKENKFG
VAYEDALNCYRAAAALPNIEVVGIDCHIGSQLLDDSPLLEALDKIIEMVDALEAEGIPIH
HLDIGGGIGIRYDDEQPVAIGDYLARVFARVDAWRASKYDGRPIQVMFEPGRSVVGNAGL
LLTEVQYLKHGEGKNFAVVDAAMNDLMRPAMYEAWHGVKTVKENAGQPRIYDVVGPVCES
GDWLARARELAIGEGDLLALMSAGAYGMTMASNYNTRGRAAEVLVDGAQAHLVRARENPA
DLFALEKIVG
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgtcccacttttcctatcgcaacggcgcattgcacgccgaagacgtctccctgcaagcg
ctggccgaacagttcggtaccccgctctacgtctattccaaggccgccctggtgcagaac
ttctcggcctacgccgatgcctgccgcgcagccggtcgtgtcgagggcggcaaggggggc
gccctggtgtgttactcggtcaagtccaattccaatctggcggtgctgaacctgctgggc
aagctgggctcgggtttcgacatcgtttccggtggcgaactgctgcgcgtggtggccgcc
ggcggcgatgcccgcaaggtgatcttctcgggcgtgggcaagggccgcgacgagatgaag
ctggcgctggaacatgacatcctctgcttcaacgtcgaatccatccccgaggtggcgcga
ttgaacgaagtggccggcgcactgggcaagcgcgcgcgcatctcgctgcgcgtgaacccc
aacgtggacgccaagacccacccctacatctccaccggcctgaaggaaaacaagttcggc
gtggcctatgaagatgcgctgaactgctaccgcgccgctgccgccctgcccaacatcgaa
gtggtgggcatcgattgccacatcggctcgcagctgctggacgactccccgctgctggaa
gcgctggacaagatcatcgagatggtcgatgcgctggaagccgaaggcatcccgatccac
cacctcgacatcggcggtggcatcggcatccgttacgacgacgaacagccggtggccatc
ggcgactacctggcgcgcgtgttcgcccgcgtcgatgcctggcgtgccagcaagtacgat
ggccgtccgatccaggtcatgttcgagccgggccgctcggtggtcggcaatgccggcctg
ctgctgaccgaggtgcaatacctcaagcatggtgaaggaaaaaacttcgcagtggtcgat
gctgccatgaacgatttgatgcgtccggccatgtatgaagcctggcatggcgtcaagaca
gtgaaggaaaacgccggccagccccgcatctacgatgtggtcggcccggtgtgtgaatcc
ggcgactggctggcccgcgcgcgcgaactggccatcggcgaaggggatttgctggcgctg
atgtcggccggcgcctatggcatgaccatggcctccaactacaacacgcggggtcgtgcg
gccgaggtgctggtcgatggcgcgcaagctcacctggtccgggcgcgcgaaaaccctgcc
gacctgtttgcactggaaaagatcgtcggctga
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