Herbaspirillum sp. DW155: HBDW_02290
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Entry
HBDW_02290 CDS
T10195
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K18302
membrane fusion protein, multidrug efflux system
Organism
hew Herbaspirillum sp. DW155
Module
hew_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
hew00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hew02000
]
HBDW_02290
01504 Antimicrobial resistance genes [BR:
hew01504
]
HBDW_02290
Transporters [BR:
hew02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
HBDW_02290
Antimicrobial resistance genes [BR:
hew01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
HBDW_02290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CusB_dom_1
Motif
Other DBs
NCBI-ProteinID:
BEV13441
LinkDB
All DBs
Position
245063..246208
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AA seq
381 aa
AA seq
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MKPVSRPRPLASRRRAPLARLALLSIPLTLMLSACSKPAPVADAPREVVVLQAQERGSNQ
PLHLPAEVQSRYVTSLSFRVAGQLVERRVHLGDTVRKGQVLARLDPADADQNAASARAEL
AAARLHLEASEKQLQRDTAQAAEQLISAQQLEQSQDAHAAALAQFKSAQARASVAGNQSD
YTTLVARHDGVISAEQANTGDVLGAGQPVYSLAWSGAVDVVTDVADRQLAGLQPGAAAEV
TLAALPGKTYQGRVREISPAADPQSRTFRIKLTLEQPDANVRLGMTGEVRITPAATAQGQ
VLLLPATALFHQGGKPAVWIVGGDGKLELRPVTVAAYGERSISLSQGVGTHDKVVVQGVH
TLTVGEKVKPVAPLHAEDFAL
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcctgtctcacgtccgcgtcctcttgcatcccgtcgccgcgccccgctggcgcgc
ctggcgctgctgtccatccccttgaccctgatgctgtcggcctgcagcaagcccgcgccg
gtcgccgatgcgccgcgcgaagtggtggtattgcaggcgcaggagcgcggcagcaaccag
ccgctgcacctgccggccgaagtgcagtcgcgctacgtgacctcgctgtccttccgcgtc
gccggccagttggtggagcgccgcgtgcatctgggcgataccgtgcgcaagggtcaggtc
ctggcccgtcttgatcctgccgatgccgaccagaacgccgcttcggcccgcgccgaactg
gccgccgcccgcctgcacctggaagcttccgagaagcagttgcagcgcgataccgcccag
gcggccgagcagttgatcagcgcccagcaactggagcagagccaggatgcgcacgctgct
gcgctcgcgcagttcaagagcgcgcaggcccgcgcctccgtggccggcaaccagagcgat
tacaccacgctggtggcccggcatgatggcgtgatcagcgccgaacaggccaataccggc
gacgtcctcggtgccgggcagccggtctattcactggcctggtcgggtgcggtggacgtc
gtgaccgacgtggccgaccgccagctggccggtctgcagcccggtgcggccgccgaggtc
acgctggcggcactgcccggcaagacctatcagggccgcgtgcgtgaaatcagcccggct
gcggatccgcaaagccgcaccttccgtatcaagctcaccctggaacagcctgatgccaat
gtgcgcctgggcatgaccggcgaagtgcggatcacccccgccgccacggcgcagggtcag
gtcctgctgctgccggccacggccttgttccatcagggtggcaagccggcggtgtggatc
gtaggtggcgacggcaagctggaactgcgtcccgtaacggtggccgcttatggcgagcgc
agtatttcgctctcgcaaggtgtaggcacccatgacaaggtggtggtgcagggtgtgcat
accctgaccgtgggcgagaaggtcaagccggtcgcgcccctgcacgccgaggactttgcc
ctatga
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