Herbaspirillum sp. DW155: HBDW_02640
Help
Entry
HBDW_02640 CDS
T10195
Name
(GenBank) filamentous hemagglutinin N-terminal domain-containing protein
Organism
hew Herbaspirillum sp. DW155
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPS
Motif
Other DBs
NCBI-ProteinID:
BEV13476
LinkDB
All DBs
Position
291250..295737
Genome browser
AA seq
1495 aa
AA seq
DB search
MTSTSTSTPSQVPAPPVIELLPPSLTVRVGKRRLTLAWRARKPLPGLLSRLLQRAWVRLL
APGLRLSLTAAAVGAAWQAPVLAAAPAANTLPTGWSVVNGNLGFNQNGNTLNINQGSPQA
IARFASFSIGADAAVNVAQPSASAALLAKVSGADISQIYGKLSANGTVVLYNPNGVVIGP
SGTVDAARFIATSLAISDSDFLAGKLNFTRDGTAGLVDNQGKISSATGGSVYLIGGSVSN
SGLITSPQGEVILAAGQTVTLADTATPGVTVNITGSAGDVTNLGSITAEAGRIGVAAGLI
TNSGVINASSVVREGGRIFLRASGNLTTTATSSIGADGTKGGNITLYAQNKAFIDGDVSA
QGASAQGGFVDTSGLQQLDVVKVPKVGAGGTWLIDPYDLEVVRDPPQHNATLEPVACSTD
YAITSTANGSQIQAQTISNQLSNGTSIQLVTGSGGSQAGNITVSADIIKSGESVSTLTLN
AANNISINANITAVAGSLNLNLNTGLGNANTSHLSTISSGATVTLNGGYLVARNGYTGGY
ANGSLAINGTLDLGNSGGLSAGQVVVGSGGLLQASGGSEITLRGLTNNGTVSLGGDGYSS
VRIGSGGILNDGNISLNGAGRLRSRGNVVNTANGRILVGSGEESSFLLSGSRGLSNNGTI
TLANGSLRFRNIDNNANATITGNGALRASGTFYNAGTLSPGGAGAIGALTLSGGKFEQAD
SGRILIDIASDAQDGYDRVVFNTRSVTLGGTLETHLLNAYNSAAPLGVFSFANELGSHNN
FRYVTGDIVNDGGTEKMVKTIYSDGSVSLALRGPDTFTLAATQSEIGWGDSRNWVSNSNT
ALPTRIDTVIIGSGRSLSHQDGDDVVANLIVNEGSSLYQNGGSLTVRNSATVNGSLNVWN
GSLSVGNSTSIAGNVRVGGGNLSLNGTTGIDNGGQLWLGTGTVTLNGTNNVEGSILVDGG
GSLTTNGTTNINGSLNVSYGTVTMNGINNLAGQVDVSDALTLNGTNNVSGSVLVSSGTMA
LNGDTRGAGSISIGSEGGGGDGCDGGCNEESFRVMPRLTSSSGSVTINNASQSALSVDLL
HGSLTVGGNVRLGSLAVGDDGQVTGNVGSRLVVAGSFSQGSGNMTLADAALVQDSGNLSV
GNISAANLLLQARQGNITQNDQSSLHVSSQLIASASRGITLNSSANQIAGFAASNSGSGD
ITLVNRLNTSDATAVAVNGVTAANGNISIDNTGGVVTSALGSKAGFLGNLPLSAEGSTLN
TSDLLASLGIDASGQLKSTNGSISVVTHSPLTIGSGGVNASGTITLTASASSGSNDTLTI
NGVLVTTGGNITLSAGDSMTINANISTAAPGVALFSVASGQLIGYAQGVTITDANGVRTP
VLGTSNVSNPVSNTVSNPVNNTVSNTVSNTVNSTVVAEPSQTAQVVQQQQNQQTKNLQAT
LNNVQVSDSPVQLQGTVNVVQQTGTGNQTVGGTTDHFGDEGDNRKQVKKPLPMCT
NT seq
4488 nt
NT seq
+upstream
nt +downstream
nt
atgacatcgacatccacatccactccctcgcaagtgccggcgccaccggtcatcgaactg
ctgccgccctcgctcacggtgcgcgtgggcaaacgccggctgaccctcgcgtggcgtgcg
cgcaagccactgccggggctgctctcgcgcctgttgcagcgggcgtgggtgcgcctgctg
gcaccgggcttgcgcctgtcgctgacggccgctgccgtgggcgcggcctggcaggcgccg
gtgctggcggccgctcccgccgccaacaccttgcccacgggctggagcgtggtcaacggc
aatctcggtttcaaccagaacggcaataccctcaacatcaaccagggctcgccccaggcc
atcgcccgtttcgcgtccttcagcatcggcgccgatgcagcggtcaacgtggcccagccg
agtgcatcggcggccttgctggccaaggtcagcggggccgacatctcgcagatctacggc
aagctctcggccaacggcacggtggtgctgtacaaccccaatggcgtggtgatcggcccc
agcggtacggtagacgcggcacgcttcattgcgacctcgctggccatcagtgacagcgat
ttcctggccggcaagctcaacttcaccagagacggcacggccggtctggtggataaccag
ggcaagatcagttcggcaacgggtggcagcgtgtacctgatcggcggtagcgtttccaac
agcggactcatcaccagcccgcaaggcgaagtcatcctcgcggccggccagaccgtcacc
ctggccgatacggccacgccgggcgtgaccgtcaacatcaccggcagcgccggcgatgtc
accaacctgggcagcatcacggccgaggcgggccgcatcggggtggccgccggcctcatc
accaacagcggcgtcatcaatgcttccagcgtggtgcgcgagggcgggcgcatcttcctg
cgggcctcgggcaacctgaccacgaccgccacctccagcatcggcgccgacgggaccaag
ggcggcaacatcacgctctatgcgcaaaacaaggcgttcatcgatggcgatgtctcggcc
cagggcgcttccgcgcagggtggcttcgttgatacctcgggcctgcagcagcttgacgtg
gtgaaggtgcccaaggtcggcgcgggaggcacctggctgatcgatccctatgatctggag
gtggtgcgcgatcccccgcagcacaacgctaccctggagccggtcgcctgctcgaccgat
tatgcgatcacctccacggccaatggctcgcagatccaggcccagaccatttccaatcag
ctcagcaacggtaccagcatccagctggtgaccggcagcggcggcagccaggcaggcaac
atcacggtcagtgccgacatcatcaagagcggagagtcggtcagcacgctcacgctcaat
gccgccaacaacatcagcatcaacgccaacatcaccgccgtggcaggcagcttgaacctg
aacctcaataccggtctcggcaacgctaatacctcgcacctgagcaccatcagcagcggt
gccaccgtcacgctcaacggtggctatctggtcgcccgcaatggctataccggcggctat
gccaatggctcgctggcgatcaatggcacgctcgacctgggcaattccggcggcttgagc
gctggtcaggtcgtcgtgggcagcggcgggctgctgcaggcgtccgggggtagcgagatc
actctgcgcgggctgaccaacaatggcacggtgagcctgggcggcgatggctacagcagc
gtgcgcatcggtagcgggggaatcctcaacgatggcaacatcagcctgaacggcgccggg
cggctgcgctcacgcggcaatgtcgtcaacaccgccaacgggcgcatcctggtggggtcc
ggcgaggagtcatctttcctcctgtccgggtcgcgcggcctgagcaacaacggcaccatc
acgctggccaatggcagtctgcgcttccgcaatatcgacaacaacgccaatgccaccatc
accggcaatggtgcgctgagggcgagcggtaccttctacaacgccggtacgctctcgccc
ggtggtgctggcgcaatcggtgcactcaccctcagcggcggcaagttcgagcaggccgac
agcggcaggatcctcatcgacatcgcttccgacgcccaggacggctatgaccgggtggtc
ttcaatacccgctccgtgaccctgggcggcacgctggagacgcatctgctcaatgcctat
aactctgcggcaccgctgggggtcttcagttttgccaacgaactgggcagccacaacaat
ttccgttacgtcaccggtgacatcgttaatgacggcggcaccgaaaaaatggtcaagacc
atctacagcgatggctccgtcagcctggccctgcgtggaccggataccttcacgctggcc
gccacccagtcagaaatcggctggggcgattcgcgcaactgggtcagcaacagcaacacc
gcgctgccgacccggatcgataccgtcatcatcggttccgggcgcagcctgagtcaccag
gacggcgacgatgtggtggccaacctgatcgtcaacgaggggagcagcctgtaccagaat
ggcggcagcctgaccgtacgcaacagtgccaccgtcaatggctcgctgaacgtctggaat
ggcagcctcagcgtgggcaattccaccagcatcgccggtaatgtccgcgtcggtggcggc
aacctcagcctgaacggtaccaccggcatcgacaacggcggccagctctggctcggcacc
ggtaccgtcacgctcaacggcaccaacaacgtggagggcagcatcctggtcgatgggggc
ggttctctgaccaccaacggcaccaccaacatcaacggatcgctcaatgtgtcctatggc
acggtgacgatgaacggcatcaacaacctggccggtcaggtcgatgtcagtgatgcgctc
accctcaatggcaccaacaatgtgagcggcagcgtgctggtctcctccgggacgatggcc
ctcaatggcgacacccggggtgcaggcagcatcagcatcggtagcgagggcggcggcggt
gatggttgcgatggcggatgcaatgaagagagtttcagggtcatgccacgcctgaccagt
tcgtcgggcagcgtgacgatcaacaatgcgtcgcagtcggcgctttcggtggacctgctg
cacggcagcctgaccgtaggcggcaacgtgcggctgggtagcctggcggtgggtgacgac
ggccaggtcaccggcaatgtcggctcacgcctggtggtggccggctccttcagccagggc
agcggcaacatgacactggccgatgcggcgttggtgcaggacagcggcaacctgtcggta
ggcaatatcagcgccgccaacctgctgctgcaagcgcgccagggcaacatcacccagaac
gaccagagcagcttgcacgtaagttcgcaactgatcgcctcggccagccgcggcatcacg
ctcaacagttcggccaaccagatcgccgggtttgccgccagcaacagcggcagcggcgac
atcacgctcgtcaaccggctcaacaccagcgatgcaacggcggtagcggtcaatggcgta
acggcggccaatggcaacatcagcatcgacaataccggtggcgtagtgacttcggccctc
ggcagcaaggccggcttcctcggcaatctgcccctgagcgccgagggcagtacgttgaat
acttcggacctgctggcatcgctggggatcgatgccagtggccagttgaagagtaccaac
ggttcgatcagcgtggtcacgcatagtccgctgaccatcggcagcggtggcgtcaatgcc
tcgggcaccatcacgctcaccgccagtgcttcttccggcagcaacgatacgctgaccatc
aacggggtgctggtgaccaccggcggcaacattaccctgtcggcgggggattcgatgacc
atcaatgccaacatctcgacggcggctcctggcgtggcgctgttctcggtcgcctcagga
cagttgatcggctatgcccagggggtgaccattaccgatgccaatggcgtgcgcacgccg
gtgcttggcaccagcaacgttagcaacccggttagtaacacggtgagcaacccggtcaac
aacacggtgagcaatacagtcagcaatacggtcaacagcacggtcgttgcagagcctagc
cagaccgcccaggtggtgcagcaacagcagaaccagcagaccaagaacctgcaggccacg
ctcaacaatgtgcaggtgtccgacagtccggtgcagctgcagggcaccgtcaacgtagtg
cagcagaccggcacgggcaaccagaccgtggggggcaccacggaccacttcggtgacgag
ggcgataaccgcaagcaggtcaagaaaccgctgccgatgtgtacctga
DBGET
integrated database retrieval system
