Herbaspirillum sp. DW155: HBDW_03880
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Entry
HBDW_03880 CDS
T10195
Name
(GenBank) Fis family transcriptional regulator
KO
K03557
Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
hew Herbaspirillum sp. DW155
Brite
KEGG Orthology (KO) [BR:
hew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hew03000
]
HBDW_03880
03036 Chromosome and associated proteins [BR:
hew03036
]
HBDW_03880
03400 DNA repair and recombination proteins [BR:
hew03400
]
HBDW_03880
Transcription factors [BR:
hew03000
]
Prokaryotic type
Helix-turn-helix
Other families
HBDW_03880
Chromosome and associated proteins [BR:
hew03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
HBDW_03880
DNA repair and recombination proteins [BR:
hew03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
HBDW_03880
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_8
HTH_30
Xre-like-HTH
HTH_17
NUMOD1
HTH_psq
HTH_23
HTH_29
DUF1441
Sigma70_r4_2
Phage_NinH
HTH_28
Motif
Other DBs
NCBI-ProteinID:
BEV13600
LinkDB
All DBs
Position
433275..433508
Genome browser
AA seq
77 aa
AA seq
DB search
MSKESIEDVVKKSLEKYFRDLGEQLPTNVYDMVLATVEKPVFETVMARAEGNQSQAAEIL
GINRNTLRKKLQQHGLL
NT seq
234 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagaaagtattgaggatgtcgtcaagaagagcctggaaaaatatttccgggat
ctgggtgaacagctgcccaccaatgtctacgacatggtgctggccacggtcgaaaaaccg
gtcttcgagaccgtgatggcgcgtgccgagggcaatcagtcccaggccgccgagatcctc
ggcatcaaccgcaacacgctgcgcaagaagctgcagcagcacggcctgctgtag
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