Herbaspirillum sp. DW155: HBDW_05010
Help
Entry
HBDW_05010 CDS
T10195
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
hew Herbaspirillum sp. DW155
Pathway
hew03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hew00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HBDW_05010 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hew03019
]
HBDW_05010 (recQ)
03400 DNA repair and recombination proteins [BR:
hew03400
]
HBDW_05010 (recQ)
Enzymes [BR:
hew01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HBDW_05010 (recQ)
Messenger RNA biogenesis [BR:
hew03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HBDW_05010 (recQ)
DNA repair and recombination proteins [BR:
hew03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HBDW_05010 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
BEV13713
LinkDB
All DBs
Position
558906..560753
Genome browser
AA seq
615 aa
AA seq
DB search
MVDLDSLPPGATQQERALHVLETVFGYSSFRGHQGEIVQHVASGGDALVLMPTGGGKSLC
YQVPALLREGTGVVVSPLIALMQDQVDALAEVGVRAAFLNSTQSFDEALQIERRLRQGDL
DVLYVAPERLMTPRCLELLESARIALFAIDEAHCVSQWGHDFRPEYIKLSILHERFPQVP
RIALTATADQQTREEIIHRLQLEDARQFVSSFDRPNIRYQIVEKANGRKQLLDFIKSEHP
EDAGIVYCLSRKKVEETAEFLRGEGLNALAYHAGMDYALRTKNQARFLREDKIVMVATIA
FGMGIDKPDVRFVCHLDLPKSVEGYYQETGRAGRDGLPADAWMAYGLQDVVQQRRMIDES
EADETFKRVLGTKLDAMLSLCETLHCRRVHLLDYFGEHSSPCGNCDTCLTPPESFDATVE
VQKLLSTVYRVEQRFAPGHVIEVLRGIDGERVKQWRHDQLSVFGVGSDRGEAEWRAILRQ
VIALGLLTVDAENYSALKLTEAARPVLRGEQQVQLRRYRKPEKAKRSSQRSSFVETDLNT
EEQALFEKLRWWRMETARAHNVPAYVIFHDATMREIAKARPQSLDDLRHVTGVGEKKLET
YGAQIIELIAEMQAG
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggtcgatctcgattccctgcctcccggcgccacccagcaagaacgcgcactgcacgtg
ctggaaacggtgttcggctactcgtccttccgcggtcatcagggcgagatcgtccagcac
gtcgccagtggcggcgatgccctggtgctcatgcccaccggcggcggcaagtcgctctgc
taccaggtgccggcgctgctgcgcgagggcaccggcgtggtggtgtcgccgctgatcgcg
ctgatgcaggatcaggtcgatgcgctggccgaagtcggcgtgcgcgcggccttcctcaat
tccacccagagtttcgacgaagccctgcagatcgaacggcgcctgcgccagggtgatctg
gacgtgctctacgtcgcgccggaacgcctgatgaccccgcgctgcctggagctgctcgaa
tcggcccgcatcgcgctcttcgccatcgatgaagcgcactgcgtctcgcaatggggccat
gatttccgtccggaatacatcaagctttccatcctccacgaacgcttcccgcaggtgccg
cgcatcgcgttgacggccaccgccgaccagcagacccgcgaagaaatcatccatcgcctg
caactggaagatgcgcgccagttcgtctcctccttcgatcgtcccaacatccgctaccag
atcgtggaaaaggccaatggccgcaagcagttgctggatttcatcaagagcgaacatccg
gaagacgccggcatcgtctactgcctctcgcgcaagaaggtcgaggagaccgccgagttc
ctgcgcggcgagggcctcaatgcgctggcctatcacgccggcatggactacgcgctgcgc
acgaagaaccaggcgcgcttcctgcgcgaagacaagatcgtgatggtcgccaccatcgcc
ttcggcatgggcatcgacaagcccgacgtgcgcttcgtctgccacctcgacctgcccaag
agcgtggaaggctattaccaggaaaccggccgcgccggccgcgacggcctgcccgccgac
gcctggatggcctatggcctgcaggacgtggtgcagcagcgtcgcatgatcgacgaatcc
gaagccgacgaaaccttcaagcgcgtgctcggcaccaagctcgacgccatgctgtcgctt
tgcgagaccttgcattgccggcgcgtgcacctgctcgattacttcggcgaacactccagc
ccctgcggcaattgcgacacctgcctgaccccgccggagtccttcgatgccacggtcgag
gtgcagaagttgctctccaccgtctatcgcgtcgagcagcgctttgcgcccggccacgtg
atcgaggtgctgcgtggcatcgatggcgaacgcgtcaagcagtggcggcatgaccagctt
tccgtctttggtgtgggcagtgatcgcggcgaggccgaatggcgcgccatcctgcgccag
gtgatcgcgctgggtttgctgacggtcgatgccgagaactacagtgccctgaaactcacc
gaagctgcgcgcccggtgctgcgcggcgaacagcaggtgcaattgcgtcgttaccgcaag
ccggagaaggccaagcgcagttcacagcgttccagcttcgtcgagaccgatctcaacacc
gaagaacaggcgctcttcgaaaaactgcgctggtggcgcatggaaaccgcgcgcgcccac
aacgtgccggcctacgtcatcttccacgatgccaccatgcgcgaaatcgccaaggcccgg
ccgcaatcgctggacgacctgcgccacgtcaccggcgtgggcgagaagaaactggaaacc
tacggtgcccagatcatcgaactgattgccgagatgcaggcgggatag
DBGET
integrated database retrieval system
