Herbaspirillum sp. DW155: HBDW_07460
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Entry
HBDW_07460 CDS
T10195
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
hew Herbaspirillum sp. DW155
Brite
Enzymes [BR:
hew01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HBDW_07460
DNA repair and recombination proteins [BR:
hew03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
HBDW_07460
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GFIT
Other DBs
NCBI-ProteinID:
BEV13958
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Position
826717..829476
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AA seq
919 aa
AA seq
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MLLATVPIPPSPDFWQQAVRALLREGQPLGQALQAQQDGALDFSGVQLMVPAFSHAQNFK
AALSRELRRPYIAPRINTLSGLLAMQPPGQSAPPSESERLMQLYAQLREHGWLKKMFSAR
RNADLLPLAQTLLALSDELTLALLPEIRANANGDEAAVGRWTQALAQLLEPLAPSAHGML
SDEAALVWQVWKTQLDAHDRIVQRFDAMLALADQASLPLVWVSPTEPEPLDAAFLAAYAQ
RQPVRIVTLDWSRAAIAPLHPLYLSAWEELVREDDGIAPTPEELASAAGEAIALPLLCPA
GDLENAAVQSAQIVLRWLQQGKTDIAIVAQDRVTARRLRALLERAEVAVADETGWKLSTT
RAAAALAAWNDLVSARGETNALLDLLKSPFVFPDDAHRIDRVMRIEARLRRTNIAGDWQA
LQSAFAEAGQADDLACIITLAKQAARFGGRKTLAQWCETQRGLCQALGMEAALRADGAGT
QCLLMLDEIAAEQDGLADTFSFAEWRALLNLRLDATSFMPPIKDRRVVMLPLNGARLRRF
EAVLVIGADAAHLPSPPQETLFFSNAVRRELNLATRATRQRQQLRDLTELLCVNPEVVLC
WQTHQDGEPNPLSPWIERLELKLAQQGAAPLRRIELPPPVKQLRALPSFMPAPSAPELLP
PTLSASGFGSFLACPYQFFAQRMLRVAVMDELSDMPEKRDYGSWLHEILYRYHAHLRDNE
TPLPARAPLLARLSDEVFEREMQRHPAALAFHARWQKVMPAYLLWANEREAEGWQFAFGE
QSQSHALRWEDGGIELYGRLDRVDRNDQGERAVLDYKTRTAASLRQKVKEDDDHQLAFYG
LLAGGSVDHAHYVALELGADKKTGDVAAPDFVRRQKMLQQQITTTMQAVAHGAALPANGI
ESVCQYCEMRGLCRKGAWL
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgctgcttgctaccgtccccatcccgcccagtcctgatttctggcaacaggccgtgcgc
gcgctgctgcgcgagggccagccgctgggccaggccctgcaggcacaacaggacggcgcg
ctggatttctcgggcgtgcaattgatggtgccggcgttttcgcacgcgcagaacttcaag
gccgcgctgtcgcgcgagctgcgccgtccctacatcgcaccgcgcatcaatacgctctcg
ggcctgttggcgatgcagccaccgggccagagcgcgccgccctccgagagtgaacggctc
atgcagctctatgcgcaattgcgcgagcatggctggctcaagaaaatgttttccgcccgc
cgcaatgctgacctgctgccgctggcgcagacgctgctggcgctgtccgatgaactgacg
ctggcattgctgcccgagatccgcgccaatgcgaatggcgatgaggccgcggtcggccgc
tggacccaggccctggcgcaactgctggaaccactcgccccctcggcgcacggcatgctg
tccgatgaagcggcgctggtatggcaggtctggaagacccagctcgatgcgcatgaccgc
atcgtgcagcgcttcgacgccatgctggccctggcagaccaggccagcctgccgctggtg
tgggtcagcccgaccgaaccggaaccgctggatgcggcttttctggccgcctacgcacag
cgccagccggtgcgtatcgttacgctggactggagccgtgccgccatcgcgccgctgcat
ccgctctatctgtcggcgtgggaagaactggtacgcgaggacgacggtattgcgcccacc
cctgaggagctcgcctcagcagccggggaagccatcgccctcccgctgctgtgcccggcc
ggcgacctggaaaacgccgccgtgcaaagcgcgcagatcgtgctgcgctggctgcagcag
ggcaagaccgacatcgccatcgtggcccaggatcgcgtcaccgcgcgccgcctgcgcgcc
ctgctggaacgcgccgaagtggccgtggccgacgagaccggctggaagctgtccaccacc
cgcgccgccgctgcactggcggcctggaacgatctggtgtcggcccgtggcgaaaccaat
gcattgctggatctgctgaagtcgcccttcgtcttccctgatgacgcgcatcgcatcgat
cgcgtcatgcgcatcgaagcgcgcctgcgccgtaccaatatcgccggcgactggcaggcg
ctgcagtcggctttcgccgaagccgggcaggccgacgatctggcctgcatcatcaccctg
gccaagcaggcggcccgcttcggcggacgcaagaccctggcgcaatggtgcgagacccaa
cgcggcctgtgccaggccctgggcatggaagccgcgctgcgcgccgatggcgcgggcacc
cagtgcctgttgatgctcgatgagatcgccgccgaacaggatggactggccgatacgttt
tccttcgccgaatggcgcgcgctgctcaatctgcgtctggacgccacttccttcatgccg
cccatcaaggacaggcgcgtcgtgatgttgcccctgaacggcgcgcgcctgcggcgtttc
gaggcggtgctggtgatcggtgccgatgcggcgcatctgccttcacctccgcaggaaacc
ctgttcttctccaatgccgtgcgtcgcgaactgaacctggccacgcgcgccacgcgccag
cgccagcagttgcgcgacctcaccgaattgctgtgcgtgaatccggaagtggtgctgtgc
tggcagacccatcaggacggcgaacccaatccgctcagcccctggatcgaacgtctggaa
ctgaaactggcgcagcagggcgcagcgcccctgcgtcgcatcgaactgccgccgccggtg
aagcagttgcgcgcgctgccctcgttcatgcctgcgcccagtgcgccggagctgttgccg
cccacgttgtcggccagcggtttcggcagcttcctcgcgtgcccgtatcagttctttgcc
cagcgcatgctgcgcgtggccgtcatggacgagctttcggacatgcccgagaaacgcgac
tacggcagctggctgcacgaaattctttacagatatcacgcccacctgcgcgacaacgag
accccgctgccggcccgcgcgccgctgctggcgcggctttccgacgaggtgttcgagcgc
gagatgcagcgccatcccgccgcgctggccttccatgcgcgctggcagaaggtgatgccg
gcctacctgttgtgggccaatgaacgcgaagccgagggctggcaatttgccttcggtgaa
caatcgcagtcccatgcattgcgctgggaagatggcggcatcgagctgtatgggcgactc
gatcgtgtcgatcgcaatgaccagggcgagcgcgccgtactggactacaagacccgcacg
gccgccagcctcaggcaaaaggtcaaggaagacgacgaccatcagctggccttctacggc
ctgttggccggtggcagcgtggaccacgcccactacgtcgccctcgaactgggcgccgac
aagaaaaccggcgacgtcgccgctcccgatttcgtacgcagacagaagatgctccagcaa
cagatcaccaccaccatgcaggccgtggcccacggcgcagccctgccggccaatggcatc
gaatcggtctgccagtattgcgagatgcgcggcctgtgccgcaagggagcctggctgtga
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