Herbaspirillum sp. DW155: HBDW_08120
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Entry
HBDW_08120 CDS
T10195
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
hew Herbaspirillum sp. DW155
Pathway
hew03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hew00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HBDW_08120 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hew03019
]
HBDW_08120 (groL)
03110 Chaperones and folding catalysts [BR:
hew03110
]
HBDW_08120 (groL)
03029 Mitochondrial biogenesis [BR:
hew03029
]
HBDW_08120 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hew04147
]
HBDW_08120 (groL)
Enzymes [BR:
hew01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
HBDW_08120 (groL)
Messenger RNA biogenesis [BR:
hew03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HBDW_08120 (groL)
Chaperones and folding catalysts [BR:
hew03110
]
Heat shock proteins
HSP60 / Chaperonin
HBDW_08120 (groL)
Mitochondrial biogenesis [BR:
hew03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
HBDW_08120 (groL)
Exosome [BR:
hew04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HBDW_08120 (groL)
Exosomal proteins of other body fluids (saliva and urine)
HBDW_08120 (groL)
Exosomal proteins of breast cancer cells
HBDW_08120 (groL)
Exosomal proteins of colorectal cancer cells
HBDW_08120 (groL)
Exosomal proteins of bladder cancer cells
HBDW_08120 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BEV14024
LinkDB
All DBs
Position
complement(908817..910466)
Genome browser
AA seq
549 aa
AA seq
DB search
MAAKQVIFGDEARAKVVNGVNILANAVKVTLGPKGRNVVLERSFGAPTVTKDGVSVAKEI
ELKDKLENMGAQLVKEVASKTSDNAGDGTTTATVLAQAIVREGFKYVAAGFNPTDLKRGI
DKAVTAIVGEVKNLAKPTTTSKEIAQVGSISANSDADIGDIIAKAMEKVGKEGVITVEDG
KSLENELDIVEGMQFDRGYLSPYFINNQEKQIVALDNPFILLFDKKISNIRDLLPVLEQV
AKAGRPLLIVAEDVEGEALATLVVNNIRGILKTAAVKAPGFGDRRKAMLEDIAILTGGQV
IAEEVGLTLEKATLAELGQAKRVEIGKENTTIIDGNGEAAGIEARVAMIRTQIGEATSDY
DREKLQERVAKLAGGVALIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALL
RARANVKDLKGDNADQEAGIKIVLRAIEEPLRQIVFNAGDEPSVVVNKVLEGSGNFGYNA
SNGTYGDLVELGVLDPAKVTRSALQNAASVASLILTTDALVAEVAEDKPAGMPGGMGGMG
GMGGMDGMM
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaagcaagttattttcggcgatgaagcacgcgccaaggtcgtcaacggcgtc
aacatcctggccaacgcagtcaaggtcaccctgggtccgaagggccgcaacgtcgtactg
gagcgcagcttcggcgccccgaccgtgaccaaggacggcgtttccgtcgccaaggaaatc
gaactgaaggacaagctggaaaacatgggtgcccagctggtcaaggaagtcgcttccaag
acctccgacaatgccggtgacggtaccaccaccgctaccgtgctggcccaggccatcgtg
cgcgaaggcttcaagtacgtcgccgccggcttcaacccgaccgacctgaagcgcggtatc
gacaaggccgtcaccgccatcgtcggcgaagtgaagaacctggccaagcccaccaccacc
tccaaggaaatcgctcaagtcggctcgatctcggccaactccgatgcggacatcggcgac
atcatcgccaaggccatggaaaaggtcggcaaggaaggcgtcatcaccgtggaagacggc
aagtcgctggaaaacgaactggatatcgtcgaaggtatgcaattcgaccgcggctacctg
tcgccgtacttcatcaacaaccaagagaagcagatcgtcgctctggacaatcccttcatc
ctgctgttcgacaagaagatctccaacatccgtgacctgctgccggtgctggaacaagtc
gccaaggctggccgtccgctgctgatcgtggccgaagacgtcgaaggcgaagccctggct
accctggtggtcaacaacatccgtggcatcctgaagactgctgccgtcaaggctcctggc
ttcggcgaccgccgcaaggccatgctggaagacatcgccatcctgaccggtggccaggtg
atcgccgaagaagtcggcctgaccctggaaaaggctaccctggctgaactgggccaagcc
aagcgcgttgaaatcggcaaggaaaacaccaccatcatcgacggcaacggcgaagccgct
ggcatcgaagcgcgcgtggcgatgatccgcacccagatcggcgaagccacctccgactac
gaccgtgaaaaactgcaagagcgcgtggccaagctggccggcggtgttgcactgatcaag
gttggcgctgccaccgaagtcgaaatgaaggaaaagaaggcccgcgtcgaagacgccctg
cacgctacccgcgctgctgttgaagaaggcgtcgtgcccggcggtggcgttgccctgctg
cgcgctcgcgccaacgtcaaggatctgaagggcgacaacgccgaccaggaagccggtatc
aagatcgtgctgcgcgccatcgaagagccgctgcgccagatcgtcttcaacgccggcgac
gagccgtcggtggtggtgaacaaggtgctggaaggttcgggcaacttcggctacaacgct
tccaacggcacctacggtgacctggtggaactgggcgtgctggatccggccaaggtgacc
cgttcggccctgcaaaacgctgcctccgtggccagcctgatcctgaccaccgacgccctg
gtggccgaagtggcagaagacaagccggccggcatgcctggcggcatgggtggtatgggc
ggcatgggtggcatggacggcatgatgtaa
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