Herbaspirillum sp. DW155: HBDW_08590
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Entry
HBDW_08590 CDS
T10195
Name
(GenBank) ABC transporter substrate-binding protein
KO
K10439
ribose transport system substrate-binding protein
Organism
hew Herbaspirillum sp. DW155
Pathway
hew02010
ABC transporters
hew02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
hew00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HBDW_08590
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
HBDW_08590
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hew02000
]
HBDW_08590
Transporters [BR:
hew02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
HBDW_08590
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Lipid_DES
Motif
Other DBs
NCBI-ProteinID:
BEV14071
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All DBs
Position
957609..958547
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AA seq
312 aa
AA seq
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MFKNKLLAAALGLAFAVGTSVAHAQEVYVPLISKGFQHQFWQAVKAGADQAGKDLKVKVT
FEGPETEAMVDKQIDMLSAALAKKPQAIGFAALDSKAAIPLLKKAQAAKIPVVAFDSGVD
SDIPVTTATTDNRAAAALAADKMAELIGKEGEVAVVAHDQTSRTGVDRRDGFLERIKASY
PKIKVVSVQYGAGDQLKSTEVTKSILQAYPKIKGIFGTNEGSAIGVVNGVKEMKRKIIII
GYDSGKQQKDAIREGVMSGAITQNPVGIGYKTVEAAVKAIKGEKLPKVIDTGFYWYDKSN
IDDPKIAAVLYD
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
gtgttcaagaacaagttactggccgctgccctgggtctggccttcgccgtcggcacttcg
gtcgcgcacgcgcaggaagtgtatgtgccgctcatttccaagggcttccagcaccagttc
tggcaggctgtcaaagccggtgccgaccaggccggcaaggatctcaaggtgaaggtcacc
ttcgaaggcccggaaaccgaagccatggtcgacaagcagatcgacatgctctccgccgcc
ctggccaagaagccgcaagccatcggctttgccgccctggacagcaaggccgccattccg
ctgctgaagaaggcacaggccgccaagattccggtggtggcctttgactcgggcgtggac
agcgacatccccgtcaccaccgccaccaccgacaaccgcgccgctgcagccctggccgcc
gacaagatggccgagctgatcggcaaggaaggtgaagtcgccgtggtcgcccacgaccag
accagccgcaccggtgtggaccgccgtgatggcttcctggaacgcatcaaggccagctat
cccaagatcaaggtggtcagcgtgcaatatggtgcgggcgaccagttgaagtccaccgaa
gtcaccaagtccatcctgcaggcctatcccaagatcaagggcatcttcggcaccaacgaa
ggctcggccatcggtgtggtcaatggcgtcaaggaaatgaagcgcaagatcatcatcatc
ggctatgactccggcaagcagcagaaggatgccatccgtgaaggcgtgatgtccggcgcc
atcacccagaacccggtgggcatcggctacaagaccgtggaagcggcggtcaaggcgatc
aagggcgagaagttgccgaaggtcatcgataccggcttctactggtacgacaagagcaac
atcgacgatcccaagatcgcagccgttctgtacgactga
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