Herbaspirillum sp. DW155: HBDW_08710
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Entry
HBDW_08710 CDS
T10195
Name
(GenBank) substrate-binding domain-containing protein
KO
K10439
ribose transport system substrate-binding protein
Organism
hew Herbaspirillum sp. DW155
Pathway
hew02010
ABC transporters
hew02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
hew00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HBDW_08710
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
HBDW_08710
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hew02000
]
HBDW_08710
Transporters [BR:
hew02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
HBDW_08710
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
SBP_bac_11
Peripla_BP_3
Glyco_hydro_3_C
Motif
Other DBs
NCBI-ProteinID:
BEV14083
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Position
968566..969489
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AA seq
307 aa
AA seq
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MKKALTALALSAATVATLAASPASAQELSRLKIGMSFQEMNNPYFVSMKKALDDAAKSFG
AKVIVTDAAHNVAKQIADIEDMLQQNIDILLINPTDSAGVEAAVKAAKARNVIVVAVDAN
ASGPVDMFVGSKNKDAGYQSCRALADAIGGKGEVAILDGIPVVPILQRVEGCKQALGEYK
DIKLVATQNGRQDRSVALGVVENMIQSRPNLKGIFSVNDGGAMGALAAIQGSGKDIKLTS
VDGAPEAVKAIADGGPFIETTAQFPRDQVRVGLAMALAKKWGARVVPKEVPIDVMPVTKK
NAAGFSW
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagcactgaccgcactggccctgtcggccgccaccgtagccacgctggccgct
tccccggcaagcgcccaggaactgtccaggctcaagatcggcatgagcttccaggaaatg
aacaatccctatttcgtctcgatgaaaaaggccctcgatgatgcggccaagtccttcggt
gccaaggtcatcgtcaccgatgccgcccacaacgtggccaagcagattgccgacatcgaa
gacatgctgcagcagaacatcgacatcctgctcatcaatccgaccgactcggccggcgtg
gaagcggccgtcaaggcagccaaggcgcgtaacgtcatcgtggtggcggtcgatgccaat
gcctccggtccggtggacatgttcgtcggttccaagaacaaggacgccggttaccaatcc
tgccgtgcgctggccgatgccatcggcggcaagggcgaggtggccatcctcgacggcatt
cccgtggtacccatcctgcagcgcgtggagggctgcaagcaggccctgggcgaatacaag
gacatcaaactcgtggccacccagaacggccgccaggaccgctcggtggccttgggcgtg
gtggaaaacatgatccagtcgcgccccaacctcaagggcatcttctcggtcaatgacggc
ggtgcgatgggtgcgctggcggccatccagggcagcggcaaggacatcaagctgacctcg
gtggacggtgcgcccgaagccgtcaaggccattgccgatggtggcccgttcatcgaaacc
accgcgcagttcccgcgtgaccaggtgcgcgtgggtctggcgatggcgctggccaagaag
tggggcgcgcgcgtggtgcccaaggaagtgcccatcgacgtcatgccggtgaccaagaag
aacgcggccggcttcagctggtaa
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