Herbaspirillum sp. DW155: HBDW_08880
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Entry
HBDW_08880 CDS
T10195
Name
(GenBank) ABC transporter permease
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
hew
Herbaspirillum sp. DW155
Pathway
hew02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hew00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HBDW_08880
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hew02000
]
HBDW_08880
Transporters [BR:
hew02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
HBDW_08880
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Ortholog
Paralog
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
BEV14100
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All DBs
Position
complement(986393..987676)
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AA seq
427 aa
AA seq
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MTTIATRSAAAMPLAEPDPQQLKRDLRAAQTRKRLGALALIAPLAIFLLLTFVAPIVALL
QRAIENPEVATTLPQTVAVLARWDRKSALPDQAYAALAEDLARAKEDTTAGNLARRLNIE
MAGSRSLVMGTARAMPLRDAEGKPLSPAAAREAIIALNAQWGQPDVWRVIAQNGSVYSPY
YLLASLDLRQNVFGDIEAAPPESSIYRTIFGRTLWMSAVVTFFTLLLAYPLAYWLSTMPE
RRANLLMILVLIPFWTSILVRVAAWIVLLQSEGLVNKALMLAGLTQSPLELVFNRVGVYI
SMTHILLPFMILPLYSVMKSVPPTYLKAAVSLGSHPFAAFWRVYVPQTYPGVGAGVLLVF
IMAGGYYITPALLGGPNEQMVSYFIAYFINTTINWGMACALGALLLAATLVLYGVYRRFA
KVDVGIS
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccatcgccacccgctccgccgccgccatgcccctggccgaacctgatccgcag
caactcaagcgcgacctgcgcgccgcccagacccgcaagcgcctgggggcgctggccttg
atcgcgccgctggcgatctttctgctgctgaccttcgtggcgcccatcgtggccctcctg
caacgcgccatcgaaaaccccgaagtcgccaccaccctgccgcagaccgtggccgtgctg
gccagatgggatcgcaagtcggccctgcccgaccaggcttatgcggcgctggcagaagac
ctggcccgtgccaaggaagacaccaccgccggcaacctggcacggcgtctgaatatcgag
atggccggctcgcgctcgctggtgatgggcaccgcacgcgccatgccgctgcgcgatgcc
gagggcaaacccttgagcccggctgccgcgcgcgaggccatcatcgccctcaatgcgcag
tggggccagcctgacgtgtggcgcgtgatcgcccagaacggctcggtctactccccctat
tacctgctggcttcgctggacctgcgccagaacgtcttcggcgacatcgaagccgcaccg
cccgaatcctcgatctaccgcaccatcttcggccgcacgctgtggatgagtgcggtggtc
accttcttcaccctgctcctggcctatccgctggcctactggctctccaccatgccggag
cgccgcgccaacctgttgatgatcctggtgctgattcccttctggacctccatcctggtg
cgcgtggcggcctggatcgtgctgctgcagtccgaaggcctggtcaacaaggcgctgatg
ctggcaggtctcacgcaatcgcccctggagctggtcttcaaccgcgtcggcgtgtatata
tcgatgacccacatcctgctgcccttcatgatcctgccgctctacagcgtcatgaaatcg
gtgccccccacttacctgaaagcagccgtgtcgctgggcagccatcccttcgccgccttc
tggcgcgtgtacgtgccgcagacctatccgggtgtgggtgcgggcgtgctgctggtcttc
atcatggccggcggctactacatcaccccggcgctgctgggtggtccgaacgaacagatg
gtgagctacttcatcgcctacttcatcaacaccaccatcaactggggcatggcctgcgcg
ctgggtgccctgctgctggcggcgaccctggtgctgtacggcgtctatcgccgcttcgcc
aaggtcgatgtgggcatcagctga
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