Herbaspirillum sp. DW155: HBDW_11680
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Entry
HBDW_11680 CDS
T10195
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
hew Herbaspirillum sp. DW155
Pathway
hew03420
Nucleotide excision repair
Brite
Enzymes [BR:
hew01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
HBDW_11680
Transcription machinery [BR:
hew03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
HBDW_11680
Chromosome and associated proteins [BR:
hew03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
HBDW_11680
DNA repair and recombination proteins [BR:
hew03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
HBDW_11680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
BEV14380
LinkDB
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Position
1297044..1299320
Genome browser
AA seq
758 aa
AA seq
DB search
MSAVTVPRYTISVRALCEFTAKQGDLDLRFTPTPTAQEGIAGHAVVAGRRGEGYQSEVTL
SADHGALHVRGRADGYDPARQRLEEVKTYRGQLSSLPDNHRHLHWAQLRVYGHLMCEKLG
LERIHLALVYFDIGSQQETVLEETRSREELAALFAGQCERFMRWAEQELAHRAARDAALQ
GLRFPHGDFRPGQRQLAEAVFRAHSGRRSLLAQAPTGIGKTLGTLFPALKAAPAQQLDKI
IFLAAKTPGRQLALDAAMTLKSQGDLPLRVLELCARDKACEYPDRLCRGDACPLAQGFYD
RLPAARAACLTQPLLDREHLRSVALQHQVCPYYLGSEMTRWSDVIVGDYNYWFDGGAMLY
GMAQAHDWRVSVLADEAHNLVARARSMYSAQLSRACLRAARAVAPPAVAKALERLGRAWT
AAGKKADLPYQVLEAPPPRFVDALSSSVGAISDYLAQVALPLEPPLRDFYFDAMAFVRLA
ESFGPHSLFDLTREDERNTVLCIRNVVPAPFLGPRFAFAHATTLFSATLAPWNYFADLLG
MPASTAWVDVESPFHASQLQVKVAHRISTTWQRRAASIAPICGLMARQFEQRPGNYLAFF
SSFAYLQQARDAFTRAHPQIATWQQSRGMSESDRDAFLARFEHGGQGIGFAVLGGSFGEG
VDLPGERLIGAFVATLGLPQFNPVNEQLRLRMEQLFGCGYDYTYLFPGLQKVVQAAGRVI
RTETDQGTVWLIDQRFGRPEVQALLPAWWQLDAHAAAT
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccgtcaccgtcccgcgttacaccatatcggtgcgcgcgctctgcgaattcacg
gccaagcagggcgatctcgacctgcggtttacgcccacgccgaccgcccaggaaggcatc
gccggccatgccgtcgtggccgggcgcaggggggagggctaccagagcgaagtgacgctt
tctgcagaccatggcgcgctgcatgtccggggacgcgccgatggctatgatcccgcccgc
cagcggctggaagaagtgaagacttatcgcggccagctctccagcctgccggacaatcac
cgtcacctgcactgggcgcaactgcgcgtgtatggccacctgatgtgcgagaagctgggg
ctggagcgcatccacctggcgctggtgtatttcgacatcggcagccagcaggaaacggtg
ctggaagaaacccgcagccgcgaggaactggcggcactctttgccgggcagtgcgagcgc
ttcatgcgctgggccgaacaggagctggcccatcgtgccgcgcgcgatgccgctttgcag
gggctgcgctttccgcatggcgacttccgtcccggccagcgacaactggccgaggccgtg
ttccgcgcccacagcggccggcgcagtttgctggcgcaagcgcccaccggtatcggcaag
accttgggcacgctctttccggcactcaaggcagcgcctgcacagcaactggacaagatc
atcttcctcgctgccaagacccccggccggcaactggcgctggatgcggcaatgacgctg
aagtcgcagggcgatctgcccctgcgcgtgctggaactgtgcgcacgcgacaaggcctgc
gaatacccggaccggttgtgccgcggggacgcctgcccgctggcgcagggtttctacgac
cgcctgcctgcggcccgcgcagcctgcctgacgcagcccttgctggaccgcgaacacctg
cgcagcgtggccctgcagcatcaggtctgtccctactacctgggcagcgagatgacgcgc
tggagcgacgtcatcgtcggcgactacaactactggtttgatggcggcgccatgctctac
ggcatggcacaggcgcatgactggcgcgtgagcgtgctggccgacgaggcgcacaacctg
gtcgcgcgcgcccgcagcatgtacagcgcgcaactgagccgcgcatgcctgcgcgccgca
cgtgccgtggccccgccagcggtggccaaggcgctggaacggctgggccgcgcctggact
gccgccggaaaaaaagccgacttgccctaccaggttctggaggcgccgccgcccagattc
gtcgacgccttgagcagcagcgtgggcgccatcagcgattacctggcccaggtggcgctg
cccctggagccgccgttgcgcgatttctacttcgacgccatggccttcgtgcggctggcc
gaatccttcggtccgcactcgttgttcgatcttacccgcgaggatgagcgcaacaccgtc
ctgtgcatccgcaacgtggtgcccgcccccttcctgggcccgcgctttgcctttgcccat
gccactacgttgttctcggccacgctggcgccgtggaattactttgccgatctgctgggc
atgccggcctcgacggcctgggtggatgtcgaatcacctttccacgccagccagttgcag
gtcaaggtggcgcaccggatttccaccacctggcagcgccgcgccgcgtccatcgcaccg
atctgcggtttgatggcgcgtcagttcgagcaacggccgggcaattacctggcattcttt
tccagctttgcgtatttgcagcaggcgcgcgatgccttcacgcgcgcgcatccgcagatc
gccacgtggcagcagtcgcgcgggatgtccgaaagtgaccgcgatgccttcctcgcgcgc
ttcgaacacggcgggcagggcatcggttttgcggtgctgggaggctccttcggcgaaggg
gtggacttgccgggtgaacgtctcatcggcgcgttcgtcgccacgctggggctgccgcag
ttcaatccggtgaacgaacagttgcgcctgcgcatggagcagctgttcggctgtggctac
gactacacctatcttttccccggcctgcagaaagtggtgcaggcggccggtcgggtgatc
cgcaccgaaaccgaccagggcaccgtctggctgatcgaccagcgcttcggccggccggag
gtgcaggccttgttgccggcgtggtggcaactggatgcccacgctgccgcaacctga
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