Herbaspirillum sp. DW155: HBDW_17890
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Entry
HBDW_17890 CDS
T10195
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
hew Herbaspirillum sp. DW155
Brite
KEGG Orthology (KO) [BR:
hew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hew03000
]
HBDW_17890
Transcription factors [BR:
hew03000
]
Prokaryotic type
Helix-turn-helix
LacI family
HBDW_17890
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_Crp_2
HTH_3
BNYVV_TGB3
HTH_26
HTH_31
Motif
Other DBs
NCBI-ProteinID:
BEV15001
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Position
complement(1999639..2000661)
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AA seq
340 aa
AA seq
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MTRKTDPAAPLARAITKEDVARAAGVSHITVSRVINTPEKVAPATRERVEAFISSMGYIP
NMLAGGLASRRTRIVAAIVPTISHSIFAETVRGLSEQLSLQGYQLLLGQTNYSEEAETGL
VEAFIGRRVDGLVLTGVQHSARTRQRLKAAGIPVVETWDLSTQPIDMLVGFNNHAAGHAM
GDYLVRKGYRRMAFVGGEDPRALARFAGMRDALLAQGAPEPVHLVVPVGSFLQAGRETLC
RLLALQPAIEAAFFSNDVMAAGAALECARRGIAVPQRMALAGFANLEIATEVLPALTTVQ
ISAHEIGVTAAEMLLTRFDGQAVSEPLCDLGYCILERDSA
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcaaaaccgatcctgccgccccgctcgcccgcgccattaccaaggaagacgtg
gcacgcgccgccggggtctcgcacatcacagtgtcgcgggtgatcaatacgcctgaaaaa
gtcgcccctgccacgcgcgagcgggttgaagccttcatcagcagcatgggctacattccc
aacatgctggccggcggcctggcctcgcgccgtacccgcatcgttgcggccatcgtcccc
accatcagccattcgatctttgccgaaaccgtgcgcggcctgtccgagcagttgagcctg
cagggttaccagttgctgctggggcagaccaattattcggaagaggcggaaaccggcctg
gtggaagccttcatcggccgtcgcgtggatggcctggtcttgaccggcgtgcagcactcg
gcccgcacgcgccagcgcctgaaagcggccggcattccggtggtggaaacctgggacttg
agcacgcagcccatcgatatgctggtgggcttcaataaccatgccgccgggcacgccatg
ggggattatctggtacgcaagggctatcgccgcatggccttcgtgggcggcgaggacccg
cgcgcactggcgcgctttgccggcatgcgcgatgccttgctggcccagggcgcacccgag
ccggtgcatctggtggtcccggtgggcagcttcctgcaggccgggcgcgagaccctgtgc
cggctcctggcgctgcagccggccatcgaggccgccttcttcagtaatgacgtcatggcc
gccggcgccgccctcgaatgtgcgcgacgcggcatcgccgtgccgcagcgcatggcactg
gccggtttcgccaatctggaaattgccaccgaagtgctgcccgccctgaccacggtgcag
atcagcgcgcacgagatcggcgtgacggcggccgagatgctgctcacccgtttcgatgga
caggcggtatccgagccgctgtgcgacctcggctattgcattttggaacgcgacagcgcc
tga
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