Herbaspirillum sp. DW155: HBDW_18670
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Entry
HBDW_18670 CDS
T10195
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
hew Herbaspirillum sp. DW155
Pathway
hew00541
Biosynthesis of various nucleotide sugars
hew01100
Metabolic pathways
hew01250
Biosynthesis of nucleotide sugars
Module
hew_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
hew00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HBDW_18670 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hew01005
]
HBDW_18670 (kdsA)
Enzymes [BR:
hew01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
HBDW_18670 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
hew01005
]
Lipid A
HBDW_18670 (kdsA)
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GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
BEV15079
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Position
complement(2078419..2079258)
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AA seq
279 aa
AA seq
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MIKINEIQVGNELPFVLFGGINVLESEQFAVDVCGEYVRITKELGIPYVFKASFDKANRS
SIKSYRGPGLEAGLKIFEAVKKAHGVPVLTDVHEPYQAAEVASVCDVLQLPAFLARQTDL
VIALAKTGKVINIKKPQFVSPPQMKNIVEKFEEGGNTNVMLCDRGAQFGYDNLVVDMLGF
GVMKQVSGNKPVIFDVTHALQQRESGAAASGGRRGQVTELARAGMALGIAGLFLEAHPDP
SKALCDGPSALRLSQLKAFLEQVKAVDDLVKSLPELDTH
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagatcaatgagattcaggttggcaacgaactgcccttcgtactgttcggcggc
atcaacgtgctggaatccgaacaattcgccgtcgacgtctgcggtgaatatgtgcgtatc
accaaggaactgggcattccctacgtcttcaaggcttccttcgacaaggccaaccgctct
tccatcaagagctaccgcggccctggcctggaagccggcctgaagatctttgaagcggtc
aagaaagcccacggcgtgccggtcctgaccgacgtgcacgaaccctaccaggctgccgag
gtggccagcgtctgtgacgtcctgcaactgcccgccttcctggcgcgccagaccgacctg
gtgatcgcgctggccaagaccggcaaggtcatcaacatcaagaagccgcaattcgtcagc
ccgccgcagatgaagaacatcgtcgagaagttcgaagaaggcggcaacaccaacgtcatg
ctgtgcgaccgtggtgcgcaattcggctatgacaatctggtggtcgacatgctgggcttc
ggcgtaatgaaacaggtcagcggcaacaagccggtgatcttcgacgtgacccacgccctg
cagcaacgtgaatccggtgctgccgcatcgggcggccgccgtggccaggtgaccgaactg
gcgcgtgccggcatggcactgggcattgcaggcctgttcctggaagcccacccggatccg
tccaaggcactgtgcgacggcccgagcgcactgcgcctgtcgcagctcaaggccttcctg
gaacaggtcaaggcggtggatgatctggtcaagagcctgcctgaactggatacgcattga
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