Herbaspirillum sp. DW155: HBDW_18690
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Entry
HBDW_18690 CDS
T10195
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
hew Herbaspirillum sp. DW155
Pathway
hew00541
Biosynthesis of various nucleotide sugars
hew01100
Metabolic pathways
hew01250
Biosynthesis of nucleotide sugars
Module
hew_M00063
CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
hew00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HBDW_18690 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hew01005
]
HBDW_18690 (kdsB)
Enzymes [BR:
hew01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
HBDW_18690 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
hew01005
]
Lipid A
HBDW_18690 (kdsB)
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Motif
Pfam:
CTP_transf_3
NTP_transf_3
Hydrolase_3
Hydrolase
HAD_2
Hydrolase_like
Hydrolase_6
FANC_SAP
Motif
Other DBs
NCBI-ProteinID:
BEV15081
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Position
complement(2080334..2081614)
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AA seq
426 aa
AA seq
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MRCIAVIPARFGSSRLPGKPLADILGKPMIQHVYERVKGLEELADVVVATDDERIVAAVT
AFGGKALLTSPDHPSGTDRLREVMQHHPADLYLNVQGDEPLVNPEHLRRLLQAMLAAPQV
QAGTLCHPITAAEADNPNTVKVVRNRAGDALYFSRARIPFERESTGKTRYFKHIGVYAYR
DELLAAFPGLPPSELEGAEMLEQLRIMDAGWQIRVIEVDHAAPGVDTPACLERVRALMSG
LPDPALDAGSLADVKLVITDIDGVLTDGGIWYDDSGECLKRFHVRDGMGIKMLQEAGVNV
AVISGRDSATLRRRLADLGITVFHLGAKDKAAACRAIMAHYEVAPDATAMIGDDSIDLPG
FAACGWPVAVGDAPDYVKQHARVVLAKAGGHGAFREFSDSVLNAQNRSAIYDSVAGYAQA
MSRMTQ
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgcgctgtatcgccgtcattcccgcccgtttcggctccagccgcctgccaggcaagccg
ctggctgacatcctgggcaaacccatgatccagcacgtctacgagcgcgtaaaaggtctg
gaagagctcgccgacgtggtggtcgctaccgacgatgagcgcatcgtcgctgccgtcacc
gccttcggcggcaaggccctgctgacctcgccggaccacccttccgggaccgaccgtctg
cgcgaagtgatgcaacatcacccggccgacctctatctcaacgtgcagggcgacgagccg
ctggtcaatccggagcatctgcgcaggctgctgcaggccatgctggcggcgccgcaggta
caagcgggcacgctgtgtcacccgattaccgcagccgaggcggacaatcccaacaccgtc
aaggtggtacgcaaccgcgccggtgacgccctgtacttcagccgcgcacgcatccccttc
gagcgcgaatccaccggcaagacccgctatttcaagcacatcggcgtctatgcctatcgt
gacgaactgctggccgcctttcccggattgccgcccagcgaactggaaggcgccgagatg
ctggaacagctgcgcatcatggatgccggctggcagatccgcgtgatcgaagtcgatcac
gccgcacccggcgtcgatacgccggcttgcctggagcgcgtacgcgcactgatgtccggc
ctgcccgacccggcactggatgccggcagtctggctgacgtgaaactggtcatcaccgac
atcgatggcgtgctcaccgatggcggcatctggtacgacgacagcggtgaatgcctgaag
cgcttccacgtgcgcgacggcatgggcatcaagatgctgcaggaagccggcgtgaacgta
gccgtcatttccgggcgcgactcggccacgctgcgccgccgcctggccgacctgggcatc
accgtcttccacctcggcgccaaggacaaggccgcggcctgtcgcgccatcatggcccat
tacgaagtcgctcccgacgccaccgccatgatcggtgacgacagcatcgacctgcccggc
tttgccgcctgcggctggccggtcgccgtgggggacgcgccggattacgtcaagcagcac
gcgcgcgtggtgctggccaaggccggcggacatggcgccttccgcgaattttccgatagc
gtattgaacgcacagaaccgttctgccatctatgacagcgttgccggttatgcccaggcc
atgagccgcatgacccagtga
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