KEGG   Herbaspirillum sp. DW155: HBDW_22160
Entry
HBDW_22160        CDS       T10195                                 
Name
(GenBank) type VI secretion system tip protein VgrG
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
hew  Herbaspirillum sp. DW155
Pathway
hew03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:hew00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    HBDW_22160
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hew02044]
    HBDW_22160
Secretion system [BR:hew02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   HBDW_22160
SSDB
Motif
Pfam: Phage_GPD DUF2345 T6SS_Vgr Phage_base_V Sarcoglycan_1 DUF6484
Other DBs
NCBI-ProteinID: BEV15428
LinkDB
Position
complement(2435821..2438592)
AA seq 923 aa
MTQDAPTPRRQRTALAAPRSFPASNLPAAFLSALSGPGLSQHARLITLSSVQAADLPESL
VVERFHGKESVNDNFLFDIDALSVSTDLDLKQFIGTELTLRLLQADGSRRAWHGYCTQAS
WLGADGGLARYRLRLESFLAFLDRRRDSFLFQDMSITDIASAVLKEYPQANFSLDVTQTL
ARRDICTQYRESDFAFLRRILASEGLNFRFEHQQDGDDGQASGQQQARHKLVIFDRNAKA
PDLPGGDTRVRFHRVAATESSDAITDFSAVRSVRSNAVALASWHPEKISSPSAEERSSLD
AGELPALPIYDGSGQQDFADQQVASEHALLMLQAMELQNKRFEGAGAVRQFSAGAQFALT
QHERYPEGENRFKLLSVSHSARNNFESNIVRILDEVLPASFGQGWAGSPSPRASSDDELK
AGTYRNSFVAVRDVVPIVPAAITERLKPTARGTQTALVTGLPDAAITTDRNHRVKVQFHW
QRGQAPNPGGLRETGNLDDKDGNAPGNDASGTWVRVAEAQSGPNWGSQFTPRIGSEVLID
FIEGDIDRPVVVAQLYNGSDVPPFPAGADSAANHAGTISGWHSTAHDGSGFNQWVVDDTQ
SQLRMRLASSQARSQLSLGHLIEQADTGAQRGSYRGQGFELRSDAWGVVRGAEGLLISST
ARPAAGASVTSTQMDAHEAVAQLKGAQQLARTMGDAAAKQQALHSMAALQAKTDFISIID
PADQGKHPGSVNGQDAFKSKEGSRESDSAQPVEKFAKAAVLMESPANINWACTASTVLYA
GENLHWTSQGDTHWTAADTTSLAAGKTATLFAHEGGIQAYAGNGPVSLQAHTDALEILAD
KDVSVISVNEGIEIKARQKIVLQAGQASVTLEGGNITFACPGTFSVKGGTHAFPGGASAA
ASQTPLPNSTVSAKGSRKFSFSS
NT seq 2772 nt   +upstreamnt  +downstreamnt
gtgacccaagatgcaccaacgccccgcaggcagcgcaccgctctggctgcgccgcgctcg
tttcccgcttcgaatctccccgccgcattcctttctgcgctgtccggtccaggcctgtcg
caacatgcgcgcctgatcaccctgagcagcgtccaggctgccgatctccctgaatcgctg
gtggtggaacgcttccacggcaaggaaagcgtcaatgacaacttcctgttcgacatcgat
gcgctgtccgtctccaccgatctcgatctcaagcaattcatcggcaccgagctgaccctg
cggctgctgcaggccgatggcagccggcgcgcctggcacggctactgcacccaggcttcc
tggctgggtgccgatggcggcctggcacgctaccggctgcggctggaatccttcctggcc
ttcctcgaccggcgccgcgacagcttcctgttccaggacatgagcatcaccgacatcgcc
agcgcagtcctgaaggaatacccacaagccaatttctcgctggacgtgacacagacgctc
gcccggcgcgatatctgcacgcaataccgcgagagcgatttcgccttcctgcgccgcatc
ctggccagcgaaggcctcaacttccgcttcgaacatcagcaggatggtgacgatggccaa
gcctccggccagcaacaggcgcgacacaaactggtcatcttcgaccgtaacgccaaggcg
ccggacctgccgggtggcgatacgcgcgttcgctttcaccgtgtcgcagccaccgagtcc
agtgatgccatcaccgacttcagcgccgtgcgcagcgtgcgttccaacgcggtggccctg
gccagctggcatcctgagaagatttcttcaccttcggccgaagagcgctccagcctggat
gccggcgagctccctgccctgccgatctacgacggcagcggccagcaggactttgccgac
cagcaggtggcatcggagcatgccctgctgatgctgcaggccatggaattgcagaacaag
cgcttcgaaggtgcgggtgcggtgcgtcagttcagtgccggtgctcagttcgcgctcacc
cagcatgagcgctatcccgagggagagaaccgtttcaagctgctttcggtcagccatagt
gcccgcaataatttcgagagcaacatcgtccggatccttgacgaggtattgcccgcgtcg
ttcggccagggctgggccggctcaccatcgccgcgtgccagctcagacgatgagctcaaa
gccggcacctaccgcaacagcttcgtggccgtgcgcgatgtggttcccatcgttccggct
gcgatcacggagcgtctcaagcccactgcacgcggcacgcagaccgcattggtcaccggc
ctgccggacgctgccatcaccacggaccgcaatcatcgcgtcaaggtgcagttccactgg
cagcgcggccaggcgccgaatcctggcggcctgcgcgagaccggcaacctcgatgacaaa
gacggcaacgcgcccggcaacgacgcctccggcacatgggtacgggtggccgaagcccag
tccggccccaactggggcagccagttcacgccgcgcattggcagcgaggtgctgattgat
ttcatcgagggcgatatcgaccggcctgtcgtcgtcgcgcagctctacaacggcagcgat
gtgccgcctttcccggccggtgctgattccgcagccaaccacgccggcacgatctcggga
tggcacagcacggcgcatgatggcagcggtttcaatcaatgggtggtggacgacacgcaa
tcgcaactacgcatgcggctggcctccagccaggccagatcccagctcagtctcggccat
ctgatcgaacaggccgacaccggcgcccagcgcggcagctatcgcggccagggctttgaa
ttgcgcagcgatgcctggggcgtggtacgcggtgcggagggcttgctgatttcctcgacg
gcgcgtcccgctgccggggcaagcgtgaccagcacgcaaatggatgctcatgaagccgtc
gcccaactcaagggagcgcagcaactggcccgaacgatgggcgacgctgccgcaaagcaa
caggcgctgcatagtatggctgccttgcaggccaagaccgatttcatctccatcatcgac
ccggctgaccagggcaagcatccgggtagcgtcaatggtcaggatgcattcaagagcaaa
gagggatcccgcgagagcgacagcgcgcagccggtcgagaagttcgccaaggcggcggtg
ctgatggaatcccctgccaacatcaactgggcctgcactgcctccacggtgctctatgcc
ggcgagaatctgcactggaccagccagggcgatacccactggaccgctgccgacaccacc
agtctggccgctggcaagacggccactctgtttgcgcatgagggcggtatccaggcttat
gcgggcaacggaccggtctcgttgcaggcgcataccgatgcgctggagatcctggccgac
aaggatgtgagcgtgatcagcgtcaatgaaggcatcgagatcaaagcgcgccagaagatc
gtgctgcaggcggggcaggcttcggtgacgctggagggcgggaatattacgtttgcttgt
ccggggacgttttcggtgaaggggggaacgcatgcgtttccgggtggggcgagtgcagcg
gcaagccagactcctttaccgaacagcaccgtgagtgcaaaaggttcacggaaattctcg
ttctcaagctaa

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